| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2022 |
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| Symbol | |
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| ID | 5109913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2233323 |
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| End bp | 2234252 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503263 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187515 |
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| Protein GI | 146307050 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0620122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0797415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAT CACGCTTTCA CACGCGCCAG ACCACCTTCC GCCAGTTGGA GACCTTTCTT
GCCGTGGCCG AGCACCTCAG CGTCACCGAG GCGGCGAGGA CGCTGCATCT GGCCCAGCCC
TCGGTCTCCA CCCAGCTCGC CAAGCTGGAG CAGGCACTGC AGATGGAGCT GTTCGAACAG
CTGGGCAAGC GTCTGTATCT GACCGACGCC GGACGCGAGG TGCAGGCTGG AGCACGGGAG
ATCTTCGACG CGCTCGACCG CCTGGAAATG CGGCTGGCGC AGCTCAACGG GCTGACCACC
GGGCAGCTCC GACTCGGCGC GGTCACCACG GCAAAATACC TGGTGCCGCG CCTGTTGGGG
CCGTTCTGCA GGCAGTACCC GCAGGTGGAG GTGCAGCTGA ACATTGCCAA TCGCTCGGAT
GTGATCCGCT GTCTGGAGGA CAACCGTGAC GATCTCTACG TATTCAGCCA GCCGCCCGAT
CACCTCGACC TGGAATGCGT GGCGCTGGCA GAGAACCCGC TGGTGGTCAT CGCGCCGGCC
GGGCACCGGC TGAGCGGACA GCGTATCCGC TGGGAGCAGC TGGCGCAGGA ACCCTTCCTC
AGCCGCGAGC CGGGTTCAGG TACGCGGCTC GCCATCGAGG ATCACTTCGC CCGTCACGGC
TGGCCCTACA AGCCGCACAT GACCATTGCC AGCAACGAAG CCATCAAGGA GTCGGTGGCG
GCGGGACTGG GCATCGCCAT CCTGTCGCGC CATACGCTAA TCCACACGGC GGTGGGCAAT
CTGGTCGAAC TGGACGTGGA GGATTTTCCC ATCGCCAACC AGTGGTATCT GGTGCGCTGG
CGCAGGAAGG CACTCTCGCC GGCCGCGCAG GCCTTTTCCA GCTTTGCCGA AATGCAGGCG
CCTCTGGCAG CGCCAGCACC CCCTCAGTAA
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| Protein sequence | MNKSRFHTRQ TTFRQLETFL AVAEHLSVTE AARTLHLAQP SVSTQLAKLE QALQMELFEQ
LGKRLYLTDA GREVQAGARE IFDALDRLEM RLAQLNGLTT GQLRLGAVTT AKYLVPRLLG
PFCRQYPQVE VQLNIANRSD VIRCLEDNRD DLYVFSQPPD HLDLECVALA ENPLVVIAPA
GHRLSGQRIR WEQLAQEPFL SREPGSGTRL AIEDHFARHG WPYKPHMTIA SNEAIKESVA
AGLGIAILSR HTLIHTAVGN LVELDVEDFP IANQWYLVRW RRKALSPAAQ AFSSFAEMQA
PLAAPAPPQ
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