| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2009 |
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| Symbol | |
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| ID | 5109900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2219921 |
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| End bp | 2220718 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503250 |
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| Product | cystine transporter subunit |
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| Protein accession | YP_001187502 |
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| Protein GI | 146307037 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.163072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0074335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACTTCT CCTTCCTTCG CCGTCGCGTC CTGCTCGGTA GTCTGACTCT CGTTCTGAGC
AGCGCCTTCA GCCTGCCGAG CCTTGCCGCC GACCTGCTCG ATGACATCAA GGCCCGCGGC
GCGATCAAGA TCGGTCTGGA GGGCACCTAC CCGCCCTTCA ACTATCAGGA CGCCAGCGGC
AAGCTGACCG GTTTCGAAGT GGAGCTGGCC GAAGCACTGG CCAAGGAGCT GGGAGTCAAG
GCCGAGTTCC AGCCCACCAA ATGGGATGGC ATCCTCGCCG CACTGGAATC CAAACGGCTG
GACGTGGTGA TCAACCAGGT GACCATCTCC GACGAACGCC GGAAGAAATA CGACTTCTCC
ACGCCCTACA CCGTCTCGGG TATCCAGGCG CTGACCCGCA AGGCCGATGG CGACAGCATC
AAGAGCGCGC AGGACCTGGC CGGCAAGAAG GTCGGCGTGG GCCTCGGCAC CAACTACGAG
CAGTGGCTCA AGGACAACGT CCCGCAGGCC GACATCCGCA CCTACGATGA CGACCCGACC
AAGTTTCAGG ACCTGAACGT CGGACGCATC GACGTGATCC TGGTCGATCG CCTGGCCGCC
TTCGAGATGG TCGATAAAAC CGGTGGCCGC CTGGCCGTGG CCGGCGACGC CTTCTCCCGC
CAGGAGGCCG GCATCGCCCT GCGCAAGGGC AACCCGCAAC TGCTCGCCGC CATCGACGAA
GCCCTCGCCA AGCTGCGCGC CGACGGCACC CTCAAGCAAC TCTCCGAAAA ATGGTTCCAG
GCTGACGTCA CCCAATGA
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| Protein sequence | MNFSFLRRRV LLGSLTLVLS SAFSLPSLAA DLLDDIKARG AIKIGLEGTY PPFNYQDASG
KLTGFEVELA EALAKELGVK AEFQPTKWDG ILAALESKRL DVVINQVTIS DERRKKYDFS
TPYTVSGIQA LTRKADGDSI KSAQDLAGKK VGVGLGTNYE QWLKDNVPQA DIRTYDDDPT
KFQDLNVGRI DVILVDRLAA FEMVDKTGGR LAVAGDAFSR QEAGIALRKG NPQLLAAIDE
ALAKLRADGT LKQLSEKWFQ ADVTQ
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