| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2006 |
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| Symbol | |
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| ID | 5109897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2217571 |
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| End bp | 2218443 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503247 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187499 |
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| Protein GI | 146307034 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.126264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0111016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC TCAACGACAT GGCCCTGTTC GTGGAAGTGA TCAAGGCCAA CAGCTTTCGC
GGCGCTGCCG AGGCGCTCGG CATACCCAAC TCTACGGTTT CGCGGCGTAT CGCCGAACTG
GAAAGACGTA TCGGCCTGCG CCTGCTCAAC CGCACTACAC GGCGTATCGA ACTCACCGAA
GGCGGGCGGC TGTATTTCGA GCGCTGTCGG CGCATCGTCG ACGAGGCTCG CCTGGCCCAC
GAAGAAATCT CCGAGCTCGT AGACAACCCG AGCGGTCTGA TCCGCCTGTC CATGCCCACC
GATTTTGGAG TGGTCTACCT GGCACCGTTA TTGGCCGAAT TCGCCGAGCG CTACCCGCAG
ATTCGGTTCG ACCTGGACCT CACCCCAAAG CGTCTGGATC TGATCCGCGA GCCGGTTGAT
CTGGTGATAC GAATCGGCAC TCTGCCCGAT TCGCAGTTGA TTGCCCGGCC CCTAGGCACT
CTGCGACGCA GCCTCTTCGC CAGCCCTGCC TATCTGGCTC GCTACGGTAT GCCGGCTAGC
CCGGCGGCAC TGCTGCAGCA TCAGTGTCTG CGCATGCTCG ATGCACCCTG GGTGCTGCAC
GATACCCAGC AGAAAATCAG CCTGGCGGTA CAGGGGCGCT TTTTGCTGAA CAACATCGGC
ATGCTGCGGC GCCTGGCCCT GCTTGGCCAG GGGGTCGCCA TGCTGGTGGA CGAAATGATC
GGCGAGGACC TGGCCCAGGG GCGCCTGCAT CGCGTACTGC CCGACTGGAA GGCAGAGGAC
CTGCCGGTTT ACGCGATTAC CGAGACACGT CTCGTGCCGG CCAAGGTACG CGTGTTGATT
GATTTCCTCA CGGACCAGCT ACGGCGTGAC TGA
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| Protein sequence | MKLLNDMALF VEVIKANSFR GAAEALGIPN STVSRRIAEL ERRIGLRLLN RTTRRIELTE
GGRLYFERCR RIVDEARLAH EEISELVDNP SGLIRLSMPT DFGVVYLAPL LAEFAERYPQ
IRFDLDLTPK RLDLIREPVD LVIRIGTLPD SQLIARPLGT LRRSLFASPA YLARYGMPAS
PAALLQHQCL RMLDAPWVLH DTQQKISLAV QGRFLLNNIG MLRRLALLGQ GVAMLVDEMI
GEDLAQGRLH RVLPDWKAED LPVYAITETR LVPAKVRVLI DFLTDQLRRD
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