| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1999 |
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| Symbol | |
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| ID | 5109890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2209048 |
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| End bp | 2210367 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503240 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001187492 |
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| Protein GI | 146307027 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2056] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00435268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0272999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG TGATAGCCGC CGTCGGTATC ATGTTGGTCC TCAGCCTGTG CCGGGTGCAC
GTGGTGGTCG CGCTGATCGT CGGTGCACTG GCTGGCGGGC TGCTGGGCGG CCTGGGCGTG
GAAGGCACCT TGAAGGCCTT CAACCAGGGG CTTGGCGGTG GCGCCACGGT CGCGCTGTCC
TACGCCTTGC TCGGCGCCTT CGCTGTGGCC ATCGCCAAGT CCGGCCTGGC CCATGCCCTG
GCGGACAGGG CGCTGGCGCT GGTGGGCAGG CAGCAAGGCG AGGGCGGTGG CCTGCTCAAG
TGGCTGCTGA TCGCACTACT GCTGGCGGTG GCGATCGCCT CGCAGAACCT GCTGCCGATC
CATATCGCCT TCATTCCGCT GCTGGTGCCG CCGCTGCTTT ACGTGCTGAG CAAGCTGCAG
CTCGATCGGC GCCTGATCGC CTGCGTGCTG ACCTTCGGCC TGATCACGCC CTACATGTTC
CTGCCGGTGG GCTTCGGCGG CATCTTCCTC AACGAGATCC TGCTGGCCAA CGTGGCCAAG
TCCGGCGTCG ACGTCAGCGG CATCAGCATC ACCCGGGCCA TGGCCATTCC GGCGCTGGGC
ATGCTGGTCG GCCTGCTGGT GGCGGTGCTG TTCAGCTACC GCGGCAAGCG CGTCTACGAC
CTGCAGAAGA TCGCCCAGGC CGAACGGGTC GACGTGCAGT ACAACCCGCT GAGCCTGCTG
GTGGCGGGCG TGGCCATCGC CGCGGCATTC GTCGTACAGC TGTGGCTGGA CTCGATGATC
ATCGGCGCCC TGGCAGGCTT CGTGATCTTC TCGGTTTCCG GGGTGGTGCG CTGGAAAGAG
GCGGACGGCC TGTTCACCGA GGGCATGAAG ATGATGGCCA TGATCGGCTT CATCATGATC
GCCGCGGCTG GCTTCGCCGA GGTGATGAAG ACCACCGGCG AGGTCAAGAC CCTGGTGGAC
AGCGCAGCGG CGCTGATCGG TCACGACAAG GCAGTCGGTG CGCTGCTGAT GCTGCTGGTG
GGCCTGCTGG TGACCATGGG CATCGGCTCG TCGTTCTCCA CCATTCCCAT CATCGCCGCG
ATCTTCGTGC CGCTGGGCGT GCAGCTGGGT TTCAGCCCGC TGGCCATCGT CTGCATCGTC
GGCACGGCCG GGGCGCTGGG CGACGCCGGT TCGCCGGCCT CCGATTCGAC GCTGGGGCCG
ACCTCGGGCC TGAATGTCGA TGGCCAGCAC AACCATATCT GGGACAGCGT GGTGCCCACC
TTCCTGCATT ACAACCTGCC GCTGCTGGCG TTCGGTTGGG CCGCCGCCAT GCTGCTGTGA
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| Protein sequence | MNAVIAAVGI MLVLSLCRVH VVVALIVGAL AGGLLGGLGV EGTLKAFNQG LGGGATVALS
YALLGAFAVA IAKSGLAHAL ADRALALVGR QQGEGGGLLK WLLIALLLAV AIASQNLLPI
HIAFIPLLVP PLLYVLSKLQ LDRRLIACVL TFGLITPYMF LPVGFGGIFL NEILLANVAK
SGVDVSGISI TRAMAIPALG MLVGLLVAVL FSYRGKRVYD LQKIAQAERV DVQYNPLSLL
VAGVAIAAAF VVQLWLDSMI IGALAGFVIF SVSGVVRWKE ADGLFTEGMK MMAMIGFIMI
AAAGFAEVMK TTGEVKTLVD SAAALIGHDK AVGALLMLLV GLLVTMGIGS SFSTIPIIAA
IFVPLGVQLG FSPLAIVCIV GTAGALGDAG SPASDSTLGP TSGLNVDGQH NHIWDSVVPT
FLHYNLPLLA FGWAAAMLL
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