| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1982 |
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| Symbol | ihfA |
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| ID | 5109873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2182060 |
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| End bp | 2182362 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640503217 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_001187475 |
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| Protein GI | 146307010 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0219997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.264768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGGCTC TGACGAAAGC TGAAATGGCG GAACGTCTGT ATGAAGAGCT CGGCCTGAAC
AAAAGGGAAG CCAAGGAACT GGTGGAGCTG TTTTTTGAAG AGATCCGCCA GGCTCTTGAG
CTGAACGAAC AGGTCAAGCT TTCCGGGTTC GGTAACTTCG ACTTGCGCGA CAAGCGCCAG
CGACCCGGCC GTAACCCGAA AACAGGAGAG GAGATTCCGA TCACGGCTCG CCGTGTGGTC
ACCTTTCGTC CAGGGCAAAA ATTGAAAGCC AGGGTCGAGG CCTATGCTGG AACCAAGTCA
TAA
|
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| Protein sequence | MGALTKAEMA ERLYEELGLN KREAKELVEL FFEEIRQALE LNEQVKLSGF GNFDLRDKRQ
RPGRNPKTGE EIPITARRVV TFRPGQKLKA RVEAYAGTKS
|
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