Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1980 |
Symbol | pheS |
ID | 5109871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2178617 |
End bp | 2179633 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640503215 |
Product | phenylalanyl-tRNA synthetase subunit alpha |
Protein accession | YP_001187473 |
Protein GI | 146307008 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0362622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.097332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATC TGGATGCATT GGTCTCCCAA GCGCTCGAGG CCGTGCAACA AAGCGAAGAT GTCAACGCCC TGGAACAGCT CCGGGTTCAA TACCTTGGCA AGAAAGGCGA GCTGACCGCC CTGATGCAGA CTCTGGGCAA GCTGTCGGCC GAAGAGCGGC CGCAAGCCGG TGCCCTGATC AACACTGCCA AGAACCAGGT GCAAGATGCC CTCAACGCCC GCAAATCCGT GCTTGAGCAG GCTCTGCTCG CCGAGAAGCT GGCATCCGAG CGTATCGATG TGACCCTGCC AGGCCGTGGC CAGACCTCCG GTGGTCTGCA TCCGGTGACC CGCACGCTCG AGCGTGTCGA GCAGTTCTTC ACCCATATCG GTTACAGCGT CGCCGAGGGC CCGGAAGTCG AAGACGACTA CCACAACTTC GAAGCGCTCA ACATCCCCGG CCACCACCCG GCGCGGGCGA TGCACGATAC CTTCTATTTC AATGCGAACA TGCTGCTGCG CACCCACACC TCGCCGGTAC AGGTGCGCAC CATGGAATCG CAGCAGCCGC CGATCCGCAT CGTCTGCCCC GGCCGTGTCT ATCGCTGCGA TTCCGATATC ACCCACTCGC CGATGTTCCA CCAGGTCGAA GGCCTGTTGG TCGACGAGGG CATCAGCTTC GCCGACCTCA AGGGCACCAT CGAAGAATTC CTTCGCGTGT TCTTCGAGAA ACCGCTGGGC GTGCGTTTCC GTCCTTCCTT CTTCCCGTTC ACCGAGCCGT CGGCCGAGGT CGACATGCAG TGTGTGATGT GCTCGGGCAA GGGCTGCCGC GTCTGCAAGC AGACCGGCTG GCTGGAAGTG ATGGGCTGCG GCATGGTGCA TCCGAACGTG CTGCGCATGA GCGGCATCGA TCCGGAGAAA TACTCCGGTT TCGCCTTCGG CATGGGCGTC GAGCGCCTGG CCATGCTGCG ATATGGCGTC AATGACTTGC GCCTGTTCTT CGATAACGAC CTGCGGTTCC TGGCGCAATT TCGCTAG
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Protein sequence | MENLDALVSQ ALEAVQQSED VNALEQLRVQ YLGKKGELTA LMQTLGKLSA EERPQAGALI NTAKNQVQDA LNARKSVLEQ ALLAEKLASE RIDVTLPGRG QTSGGLHPVT RTLERVEQFF THIGYSVAEG PEVEDDYHNF EALNIPGHHP ARAMHDTFYF NANMLLRTHT SPVQVRTMES QQPPIRIVCP GRVYRCDSDI THSPMFHQVE GLLVDEGISF ADLKGTIEEF LRVFFEKPLG VRFRPSFFPF TEPSAEVDMQ CVMCSGKGCR VCKQTGWLEV MGCGMVHPNV LRMSGIDPEK YSGFAFGMGV ERLAMLRYGV NDLRLFFDND LRFLAQFR
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