| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1945 |
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| Symbol | |
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| ID | 5110072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2142495 |
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| End bp | 2143286 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503179 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001187438 |
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| Protein GI | 146306973 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0850168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCT ACTGGTATTG CCTGCGCGGC ATCGTGCTGC GCGAATGGCT GCGTTTCGTC
CTGCAGCGCT CGCGCTTTCT CAGCGCCCTG GTGCGGCCGC TGCTGTGGCT GCTGGTATTC
GCCGCCGGCT TTCGCGCCGC ACTGGGCATC GCCATCATCG AGCCGTACGA CACCTACATC
ACCTACGACA CCTACATCGT GCCGGGTCTG ACCTGCATGA TCCTGCTGTT CAACGGCATG
CAGGGCTCGC TGTCGATGGT CTACGACCGC GAGATGGGCA GCATGCGCGT GCTGCTTACC
AGCCCGCTGC CACGCGCCTT CCTGCTCGCC GCCAAGCTGC TGGCCACCGC GCTGATCTCG
CTGCTGCAGG TCTATGCCTT CCTCGCCATC GCCTGGGTTT ACGGCGTGCA ACCGCCGGCC
TGGGGCCTGC TCGCCGCGTT GCCGGCGCTG CTCCTGGTGG CGCTGCTGCT CAGTGCGCTT
GGGCTGCTGC TGTCCAACGG CATCCGCCAG CTGGAGAACT TCGCCGGGGT GATGAATTTC
GTCATCTTCC CGCTGTTCTT CCTCTCGTCC GCGCTCTACC CGCTGTGGAA GATGCGCGAG
TCCAGCGAAT GGCTGTACTG GCTGTGCGCG CTCAACCCCT TCACCCATGC GGTGGAGCTG
GTGCGCAACG CCCTGTACCT GCGCCTGCAC CTCGATGCGC TGCTGATCTG CGCCGGCCTG
ACCCTGCTCT TCGCCGTGCT CGCCGTGGTC AGCTTCAACC CGCAGCACGC GGCGCTTCGC
AAGGCGGGTT GA
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| Protein sequence | MSAYWYCLRG IVLREWLRFV LQRSRFLSAL VRPLLWLLVF AAGFRAALGI AIIEPYDTYI
TYDTYIVPGL TCMILLFNGM QGSLSMVYDR EMGSMRVLLT SPLPRAFLLA AKLLATALIS
LLQVYAFLAI AWVYGVQPPA WGLLAALPAL LLVALLLSAL GLLLSNGIRQ LENFAGVMNF
VIFPLFFLSS ALYPLWKMRE SSEWLYWLCA LNPFTHAVEL VRNALYLRLH LDALLICAGL
TLLFAVLAVV SFNPQHAALR KAG
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