| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1926 |
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| Symbol | |
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| ID | 5110054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2119682 |
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| End bp | 2120092 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503161 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001187420 |
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| Protein GI | 146306955 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.187016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATA AGACACTGCT GCATACCGCC CGGATACCCG TGCGCTGGGG CGACATGGAC
AGCTATGGGC ACGTCAACAA CATCATCTAC ATGCAATACC TGGAAGAGGC TCGGGTCGCC
TGGTTCGAGC GCGTCGGCAT TGCGATGAGT GGCGCACCTC AAGGCCCGGT AGTGCTGCAG
ACCCAGCACA CCTACCTCAA ACCCGTGGTG CACCCGGCTA CGGTAGTGGT CGAGCTGCAT
GCCGGCGCCC TGGGGCGCAG CAGCCTGGTG GTCGAACACC GCCTGACCAC GCTGGACGAT
CCCGACACGG TTTACGGCGA AGGCTACTGC AAGCTGGTCT GGATCGACCA TCGAAGCGGC
CGATCCGTTG CCCTGCCGGA GCATCTGCGC GCCCTGCTCA GCGTCACCTG A
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| Protein sequence | MTDKTLLHTA RIPVRWGDMD SYGHVNNIIY MQYLEEARVA WFERVGIAMS GAPQGPVVLQ
TQHTYLKPVV HPATVVVELH AGALGRSSLV VEHRLTTLDD PDTVYGEGYC KLVWIDHRSG
RSVALPEHLR ALLSVT
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