| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1908 |
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| Symbol | |
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| ID | 5110036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2099301 |
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| End bp | 2100431 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503139 |
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| Product | erythronate-4-phosphate dehydrogenase |
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| Protein accession | YP_001187402 |
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| Protein GI | 146306937 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.351376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.175359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATAG TCGCCGACGA AAACATTCCC CTGCTCGATG AATTCTTCGC TGCGTTCGGC
AGCATCCGCC GTCTGCCGGG GCGGGGCATC AGCGCAGCCG ACGTGCGCGA CGCCGATCTC
TTGCTGGTGC GTTCGGTGAC TCAGGTGAAC CGGGCATTGC TCGAAGGCAG CCGGGTGCGT
TTCGTCGGTA CCTGCACCAT TGGCACCGAT CACCTGGATC TCGATTACTT CGCCGAGGCC
GGCATCGCCT GGAGCAGCGC GCCGGGCTGC AACGCCCGGG GCGTGGTGGA TTACGTGCTG
GGCAGCGTGC TGACCCTGGC CGAGCGCGAA GGTGTCGACC CGGCTGCGCG TGTCTATGGC
GTGGTCGGGG CAGGGCAGGT CGGCGGGCGT CTGGTCCATC TGCTGCGCGG CCTTGGCTGG
CAGGTGCGAG TGTGCGACCC GCCACGGCAG GCCGCCGAGG GCGGCGATTT CGTCAGCCTG
GAGCGGATCA TCGAAGAATG CGACGTGATC AGCCTGCACA CGCCGCTGGA CGCCTCGACG
CGCCATCTGT TCGATGCGAC CCGCCTGGCG GCATTGCAGC CGGGCGCCTG GCTGATCAAC
GCCAGCCGTG GCGCCGTGGT GGACAACGCC GCGCTGCGCA CGTTACTGCC GCAGCGCCCC
GACCTGAAAG TGGTGCTGGA TGTCTGGGAA GGCGAGCCGC AGGCCGATGT CGAGCTGGCC
GCCCTGTGCC AGCTGGCCAC ACCGCATATC GCCGGTTACA GCCTGGACGG CAAGCTGCGC
GGCACCGCGC AGATCTACCA GGCCTGCTGT CGCGTGCTGG GCCTACCTGA ACAGGTAAGT
CTGGACGAAC TGCTGCCGGC CCCTTGGCTC AGCGAGATGA GCATCGATAG CAGCGCGGAC
CCGGCCTGGG TCCTGGCCAG TCTGTGCCGC GCGGTATACG ACCCACGCCG CGACGATGCG
GATTTCCGCC GTAGCCTGGT CGGCGACGCC GATGCCCGTC GTGCGGCGTT CGACCGCTTG
CGCAAGCACT ACCCGATGCG CCGCGAGATC GATGGCTTGC GCGTACGAAT CCAGGGCGAT
GCGCCACAGT TGGCAGCGCT GGTCCGTGCG TTGGGCGCTG CCACAACGTA G
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| Protein sequence | MHIVADENIP LLDEFFAAFG SIRRLPGRGI SAADVRDADL LLVRSVTQVN RALLEGSRVR
FVGTCTIGTD HLDLDYFAEA GIAWSSAPGC NARGVVDYVL GSVLTLAERE GVDPAARVYG
VVGAGQVGGR LVHLLRGLGW QVRVCDPPRQ AAEGGDFVSL ERIIEECDVI SLHTPLDAST
RHLFDATRLA ALQPGAWLIN ASRGAVVDNA ALRTLLPQRP DLKVVLDVWE GEPQADVELA
ALCQLATPHI AGYSLDGKLR GTAQIYQACC RVLGLPEQVS LDELLPAPWL SEMSIDSSAD
PAWVLASLCR AVYDPRRDDA DFRRSLVGDA DARRAAFDRL RKHYPMRREI DGLRVRIQGD
APQLAALVRA LGAATT
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