| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1902 |
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| Symbol | |
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| ID | 5110030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2090316 |
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| End bp | 2091881 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503133 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001187396 |
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| Protein GI | 146306931 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00326538 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.948878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAACA ACCAGCCGGT CACTCAGCGC GAACGCACCT TCCCCGCTCA GCAGCGCCTG
ATTTCCACCA CCGACCTCAA GGGCCAGATC ACCTACTGCA ACGATGCCTT CGTCGAGATC
AGCGGTTTCT CCCGCGAGGA ACTGCTGCGC GCGCCGCACA ACATCGTGCG TCACCCGGAC
GTGCCGCCAG CGGTGTTCGA CCACATGTGG ACGACCCTGA AGAAGGGCCG GCCGTGGATG
GGCATCGTCA AGAACCGCAG CAAGAATGGC GACCATTACT GGGTCAACGC CTACGTCACC
CCGATGACCG AGAACAACCA GGTCGTCGGT TACGAATCGG TACGGGTCAA ACCCACTGCC
GAACAGGTAC GCCGCGCCGA AGCGCTGTAT GCGCGGGTCA ACGCCGGCAA GTCGGCCGTC
CCCGCCAGCA ACCAGTGGCT GCCCATCGTT CAGGCCTGGA TGCCCTTCAT TCTGGTCAGC
CAGATCGGTT TTCTGATCGG CCACTGGATC GGCAGCAACT GGGGGTTCAT CCTCGCCGCC
CTGCTCTCCG TTCCCCTGGG CCTGGCCGGC ATCGCCTGGC AGACCCGTGG CATCAAGCGC
CTGCTGCGCA TCGCCGATCA GACCACCTCC GACCCGCTGA TCGCGCAGAT GTACACCGAC
AGCCGCGGCG CCGAAGCGCG CCTTGAAATG GCCATGCTCA GCCAGGATGC GCGCCTGAAA
ACCTGCCTGA CCCGCCTGCA GGACACCGCC GAACAGCTCA CCCAGCAGGC GCGTGAAGCC
GACAAGCTGG CGCACAACAG CTCGGCCGGT CTCGAGCGCC AGCGCAGCGA GACCGAACAG
GTCGCCACGG CGGTCAACGA AATGGCCGCC ACCACTCTGG AAGTGGCCAG CAACGTCGCC
CGTACCGCCA TCGCCACTCA GGAAGCCAAC CGCCTGACCA GCGAAGGGCG CAGCATTGCC
GCGGAAACCC GCGAAGCCAT CCAGCGCCTG TCGCAATCGG TGGGCGATAC CGGCGAGACC
GTCACCCGCC TGGCCCAGGA CAGCAATGAG ATCGGCGGCG TGGTCGACGT GATCAAGGGC
ATCGCCGATC AGACCAACCT GCTCGCCCTC AATGCCGCCA TCGAAGCCGC ACGTGCCGGC
GAAATGGGCC GCGGCTTCGC CGTGGTGGCC GACGAGGTTC GCTCCCTGGC CCAGCGCACC
GCGGAATCCA CCGAACAGAT CCACACCCTG ATCGCCAAAC TGCAGCGCAC CGCCGAAGAG
GCCGTGATGA CCATGGAAAT CGGCCGCAAG CAGGCCGACG AAGGCGTGGA GCGAGTGCTC
AAGGCCGACC AGGCCCTGGC CGGCATCAGC GACTCGGTGG CCAACATCGC CGACATGGCC
AACCAGATCG CGGCCGCGGC CGAAGAGCAG AGCGCCGTAG CTGACGAGAT CAACCAGAAC
ATCACCACCA TCGCCCAACT GGCCGACCAG ACCGCAGGCG AAGCCAAAAG CACCGCCAAG
CTCAGCGAGG CGCTCACCAC TACCGCACAG GGCCAATACG CCCTGGTCGA GCGCTTCAAC
CGCTGA
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| Protein sequence | MRNNQPVTQR ERTFPAQQRL ISTTDLKGQI TYCNDAFVEI SGFSREELLR APHNIVRHPD
VPPAVFDHMW TTLKKGRPWM GIVKNRSKNG DHYWVNAYVT PMTENNQVVG YESVRVKPTA
EQVRRAEALY ARVNAGKSAV PASNQWLPIV QAWMPFILVS QIGFLIGHWI GSNWGFILAA
LLSVPLGLAG IAWQTRGIKR LLRIADQTTS DPLIAQMYTD SRGAEARLEM AMLSQDARLK
TCLTRLQDTA EQLTQQAREA DKLAHNSSAG LERQRSETEQ VATAVNEMAA TTLEVASNVA
RTAIATQEAN RLTSEGRSIA AETREAIQRL SQSVGDTGET VTRLAQDSNE IGGVVDVIKG
IADQTNLLAL NAAIEAARAG EMGRGFAVVA DEVRSLAQRT AESTEQIHTL IAKLQRTAEE
AVMTMEIGRK QADEGVERVL KADQALAGIS DSVANIADMA NQIAAAAEEQ SAVADEINQN
ITTIAQLADQ TAGEAKSTAK LSEALTTTAQ GQYALVERFN R
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