Gene Pmen_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1862 
Symbol 
ID5109992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2053569 
End bp2054195 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content55% 
IMG OID640503094 
Productadenylylsulfate kinase 
Protein accessionYP_001187358 
Protein GI146306893 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0529] Adenylylsulfate kinase and related kinases 
TIGRFAM ID[TIGR00455] adenylylsulfate kinase (apsK) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.310492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCT ACGAGTACAA AAAGAACGAT AGTCAGGCAG AGGTCGTGTG GAATCACACC 
ACTGTCACCC CAGCGATGCG TTCGGCCATC AAGCAGCAAA AGCCTATGTG CATCTGGTTC
ACCGGGTTAT CGGGTTCGGG AAAATCCACT CTTGCTAATG CGCTGGAGGC CGAGCTATTT
CGCCAGGGCT TTCACACCAT GCTGCTCGAC GGTGACAACG TGCGCCATGG CTTGTGCAAG
GATCTGGGCA TGAGCGATGC AAGTCGAACG GAGAACATTC GCCGTGTGGC CGAGGTGGCG
AAGCTGTTGA TTGACTCTGG TGTGATCACG ATCACTGCAT TCATTTCGCC CTTTGCGAGG
GATCGCGATG CGGCGCGTGC GCTGTTCACT GAAGGTGAGT TCTTCGAAGT ACATGTTGCA
ACGCCGCTGT CTGAGTGCGA GCACCGTGAT CCGAAGGGGC TTTACCGGAA GGTACGTGAA
GGTGTCATCA AGGACTTCAC TGGTGTCGAT AGCCCCTACG AAGTACCGCT TACGCCCGAG
TGCGTGGTCG GCGCAGAGGG TGAATCGGTC GAGGCGAGCG TGGCCAAATT GCTTGAGCAG
TTGCTGAGCA AGATCAAGGA TTATTGA
 
Protein sequence
MNPYEYKKND SQAEVVWNHT TVTPAMRSAI KQQKPMCIWF TGLSGSGKST LANALEAELF 
RQGFHTMLLD GDNVRHGLCK DLGMSDASRT ENIRRVAEVA KLLIDSGVIT ITAFISPFAR
DRDAARALFT EGEFFEVHVA TPLSECEHRD PKGLYRKVRE GVIKDFTGVD SPYEVPLTPE
CVVGAEGESV EASVAKLLEQ LLSKIKDY