Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1847 |
Symbol | mtnA |
ID | 5109977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2033027 |
End bp | 2034103 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503079 |
Product | methylthioribose-1-phosphate isomerase |
Protein accession | YP_001187343 |
Protein GI | 146306878 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase [TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0721435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGC AATTGCTGGC GGTGGAGAGG GTTCAGGCAA TCGAGTGGCG CGACGGCGCG CTGTATCTGC TCGATCAGCG CCTGCTGCCG CATCGGCAGA CCTGGTTGCG CTTCGACCAT GCTGCAGAAG TGGCCGATGC GATTCGCGAC ATGGTGGTGC GCGGCGCACC GGCCATCGGT ATCGCCGCCG CCTATGGCCT GGTGCTGGGT GCTCGCGCCC GGCTGCAGGC CGGTGGGGAC TGGCGTGAGG CGCTGGAGGC GGATTTTGCC CGGCTCGAGC AGTCGCGGCC TACGGCGGTG AATCTGTTCT GGGCGCTGCA GCGCATGCGC GAGCGTCTGG CACGGCTCAA GGACGATGGC GAGGTGCTGG GGCAGCTGGA GGCCGAGGCA GTCGGCATTC ACGCCAGTGA CCGCGAGGCC AATCTGACCA TGGCGCAGCT GGGCATGGAG CTGATTCGCA AGCATCAGGG CAATCCGCAG GTGGTGCTGA CCCATTGCAA TGCCGGAGCG CTGGCTACCG GCGGCTTCGG TACGGCGCTG GGGGTGATTC GTGCCGCGCA TCTGGAAGGC TTGCTCGAGC ATGTCTATGT CGATGAAACC CGGCCCTGGC TGCAGGGGGC GCGGCTGACC GCCTGGGAGC TGGCCGGCGA TGGCGTGCCG GTCAGTCTGA ATGTCGATGC GGCTGCGGCG CACCTGATGA AGACCAAGGG CATCACCTGG GTGATAGTCG GCGCCGATCG GATCACGGCA AACGGTGATG TCGCCAACAA GATCGGCACC TACCAGCTGG CGGTCAACGC CATGCACCAC GGCATGCGCT TCATGGTGGT GGCGCCCAGC TCGACCATCG ACATGAGTCT GGAAAGTGGC GACGACATCC TGCTGGAGGA GCGCAGTGGC AGCGAGCTGC TGGAAGTGGC GGGGCAGCCG GTGGCAGCCG ATGTGCCTGC GGTCAACCCG GTATTCGATG TGACGCCGGC GGATCTGGTC GACTACATCG TGACCGAGAA GGGCGTGATC GAGCGTCCGG ACAGCACCAA GCTGGCGCAA CTGATGTGCC GCAAGCGACT GCACTGA
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Protein sequence | MREQLLAVER VQAIEWRDGA LYLLDQRLLP HRQTWLRFDH AAEVADAIRD MVVRGAPAIG IAAAYGLVLG ARARLQAGGD WREALEADFA RLEQSRPTAV NLFWALQRMR ERLARLKDDG EVLGQLEAEA VGIHASDREA NLTMAQLGME LIRKHQGNPQ VVLTHCNAGA LATGGFGTAL GVIRAAHLEG LLEHVYVDET RPWLQGARLT AWELAGDGVP VSLNVDAAAA HLMKTKGITW VIVGADRITA NGDVANKIGT YQLAVNAMHH GMRFMVVAPS STIDMSLESG DDILLEERSG SELLEVAGQP VAADVPAVNP VFDVTPADLV DYIVTEKGVI ERPDSTKLAQ LMCRKRLH
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