| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1843 |
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| Symbol | |
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| ID | 5109973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2029245 |
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| End bp | 2030024 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503075 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001187339 |
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| Protein GI | 146306874 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0503797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC CCATTTCAGC ATCGCGAAGG ACCCTGAACA TGTTCGACTA CACCGCCCGC
CCCGACCTGC TCAAGGATCG GGTGATCCTG ATCACCGGCG CCGGCCGCGG CATCGGTGCG
GCTGCGGCCA AGAGCTTCGC CGCCCACGGC GCCACCGTCT TGCTGCTGGG CAAGACCGAA
GCCAACCTGA GCCAGGTCTA CGACGAGATC GAGGCCGCCG GTCATCCGCA GCCGGTGGTG
ATCCCCTTCA ACCTGGAAAC CGCTCTGCCG CACCAGTACG ACGAGCTGGC GGTGATGATC
GAGAACGAAT TCGGCCGCCT CGACGGCCTG CTGCACAACG CCTCGATCCT CGGCCCGCGC
ACGCCGCTGG AACAACTCTC CGGCGACAAC TTCATGCGCG TGATGCACGT CAACGTCAAC
GCCATGTTCA TGCTCAGCAG CACCCTGCTG CCGCTGCTCA AGCTGTCGCA GGACGCCTCG
GTGGTATTCA CCTCCAGCAG CGTCGGGCGC AAGGGCCGGG CCTATTGGGG CGCCTACGCA
GTATCCAAGT TCGCCACCGA GGGCCTGATG CAGGTGATGG CGGACGAGCT GGACGGCATC
AGTAACGTGC GCGCCAACAG CGTCAACCCA GGCGCCACCC GCACCGCCAT GCGCGCCCAG
GCCTACCCGG GCGAAAACCC TGCCACCCGT CCAGCGCCGG AAGAGATCAT GCCCGTCTAC
CTCTACCTGA TGGGGCCGGA CAGCAGCGGC GCCAACGGCC AGGCTTTCGA CGCTCAGTGA
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| Protein sequence | MPRPISASRR TLNMFDYTAR PDLLKDRVIL ITGAGRGIGA AAAKSFAAHG ATVLLLGKTE
ANLSQVYDEI EAAGHPQPVV IPFNLETALP HQYDELAVMI ENEFGRLDGL LHNASILGPR
TPLEQLSGDN FMRVMHVNVN AMFMLSSTLL PLLKLSQDAS VVFTSSSVGR KGRAYWGAYA
VSKFATEGLM QVMADELDGI SNVRANSVNP GATRTAMRAQ AYPGENPATR PAPEEIMPVY
LYLMGPDSSG ANGQAFDAQ
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