| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1826 |
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| Symbol | |
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| ID | 5109956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2015253 |
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| End bp | 2016704 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503058 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001187322 |
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| Protein GI | 146306857 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.634597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.612311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGC CGACGCTGCG CATCATCGGT TTCATCATCG GCATCTTTCT GATCACCCTG
GCTGTCAGCA TGGTCATTCC CATGCTGACC CTGCTGGTCT TCGAACATCC GGAAGACCTC
AATGCCTTCC TCTGGTCGAG CATGATCACC CTGATCATCG GTCTGCTTCT GGTGGTGCCG
GGGCGCCCGG AAAACCTCAA GCTGCGCCCT CGCGACATGT ACCTGCTGAC CACCTGCAGC
TGGCTGGTGG TGTGCCTGTT CGCGGCGATG CCGATGATGC TGCTGCATCA CATCAGCTTC
ACCGATGCCT TCTTCGAGAC CATGAGCGGG GTCACCACCA CGGGCTCCAC CGTGCTCAGC
GGGCTGGACG ACGCCTCGCC GGCCCTGCTG ATCTGGCGCT CGATGCTGCA ATGGCTGGGC
GGCATCGGCT TCATCGCGAT GGCCGTGGCG ATCCTGCCGC TGTTGCGCGT CGGTGGCATG
CGCCTGTTCC AGACCGAATC CTCGGATTGG GGCGAGAAGG TCATGCCGCG CTCGCACATG
GCGGCCAAGT ACATCGTCTT CGTCTACCTG ACCTTCACCA TCCTGGGAGT GATCGCCTAC
TGGCTGAGCG GCATGAACTG GTTCGATGCC ATCAACCATT CGATGACCTC GATCTCCACC
GCCGGCTACT CCACGTCCGA CCAGTCGATG GGCAAGTTCG ATCCTGCCAG CCATTGGGTC
GCCATCGTCC TGATGGTTCT CGGCAGCCTG CCCTTCACCC TTTATGTCGC CAGCCTGCGC
GGGCACCGCA AGGCCCTGCT CCGCGACGAG CAGGTACGCG GCTTCGTCGG CATGCTGCTG
ATCACCTGCG CGCTGTTCAG CCTTTGGCTC TGGCTCAACT CCGAGCACGC CCTGATCGAC
GCCATACGAC TGGCCAGCTT CAACATCATC TCGGTGGCCA CCACCACCGG CTATGCCCTG
GGCGACTACA CCGCCTGGGG CGGTTTCGCG GTCATGGCGT TCTTCTACCT GACCTTCGTC
GGCGGCTGCT CGGGCTCTAC CACCGGCGGT CTGAAGATGT TCCGCTTCCA GGTCGCGCTG
ACCCTGCTGC ATGCCAACCT CAAGCAGATG GTGCACCCGC GCGCGGTGAT CAAGCAGCAG
TACAACGGGC ACAACCTCGA TGAGGAAATC GTCCGTTCGA TCCTTACCTT CTCCTTCTTC
ATCACCATGA CCATCGGCGC CATCGCCCTG TTTCTCGCCC TGCTCGGCCT GGACCCGCTG
ACCGCGCTGA GCGGCGCCGC CACGGCGGTG TGCAACGTCG GCCCGGGCCT GGGGCCGATC
ATCGGGCCGG CCGGCAACTT CGCCAGCCTG CCGGATGCTG CCAAGTGGGT GCTGGCCGCC
GGCATGCTGC TCGGGCGTCT GGAAATCGTC ACCGTGCTGG TGCTGTTCAC CGCCAGCTTC
TGGCGGCACT GA
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| Protein sequence | MALPTLRIIG FIIGIFLITL AVSMVIPMLT LLVFEHPEDL NAFLWSSMIT LIIGLLLVVP
GRPENLKLRP RDMYLLTTCS WLVVCLFAAM PMMLLHHISF TDAFFETMSG VTTTGSTVLS
GLDDASPALL IWRSMLQWLG GIGFIAMAVA ILPLLRVGGM RLFQTESSDW GEKVMPRSHM
AAKYIVFVYL TFTILGVIAY WLSGMNWFDA INHSMTSIST AGYSTSDQSM GKFDPASHWV
AIVLMVLGSL PFTLYVASLR GHRKALLRDE QVRGFVGMLL ITCALFSLWL WLNSEHALID
AIRLASFNII SVATTTGYAL GDYTAWGGFA VMAFFYLTFV GGCSGSTTGG LKMFRFQVAL
TLLHANLKQM VHPRAVIKQQ YNGHNLDEEI VRSILTFSFF ITMTIGAIAL FLALLGLDPL
TALSGAATAV CNVGPGLGPI IGPAGNFASL PDAAKWVLAA GMLLGRLEIV TVLVLFTASF
WRH
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