| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1795 |
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| Symbol | |
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| ID | 5109925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1969623 |
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| End bp | 1971257 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503027 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187291 |
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| Protein GI | 146306826 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.522465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGGTCT TCCTTTCCAC ACAGGATCTG ACCATGACCA CCTGCGGCGA ATTTCTCGTC
AAGCAACTCG AAGCCTGGGG TGTCGACACC GTGTTCGGCA TCCCCGGCGT GCACACCGTA
GAGCTGTACC GCGGCCTGCC GGGTAGCGGC ATCCGCCACA TCACTCCGCG CCACGAACAG
GGCGCAGGCT TCATGGCCGA CGGCTATGCC CGCGTATCCG GCAAGCCGGG CGTGTGCTTC
ATCATCACCG GCCCGGGGAT GACCAACATT CTCACCGCCA TGGGCCAGGC CTATGCCGAT
TCGATCCCCA TGCTGGTGAT CTCCAGCGTC AACGAGCGCG CGCGCCTCGG CCTGGGCAAG
GGCTATCTGC ACGAGCTGCC CAACCAGCGA GCCATGACCG CCGGCGTCAC TGCCTTCAGC
CATACCCTGA TGAGCGTCGA GGAGCTGCCC GGCGTGCTGG CCCGCGCCTT CGCCGTGTTC
GAGGGCGAGC GGCCGCGCCC GGTGCATATC GAGTTGCCGT TGGACATCAT TACCGCCGAG
GCCACCCATA TGGCCGTGGC GCCGCGGCCG ACCGTGCGCC GCCCGGCGCC CAACCGCACG
CTGATCCGCG AGGCGGCCGG CCTGCTCAAG CAGGCCGAAC GCCCCCTGCT GCTGCTCGGT
GGTGGTTGCG TCGCCGCCGA AGCCGAAGCG CGCGCCCTGG CCGCCGCGCT GGATACACCG
ACCGCGCTGA CCATCAACGC CAAGGGCCTG CTGCCGCCGG GCCACCCGCT GCTGCTGGGC
AGCAACCAGT CGCTGCGCCC GGTGCGCGAC CTGGCGCTGG AGGCCGACCT GGTGCTGGCC
ATCGGCACCG AACTGGGCGA GACCGACTAC GACGTGGTGT TCGACGGCGA CTTCCGCCTG
CCCGGCCGGC TGATCCGCAT CGACATCGAT GCCCAGCAGC TGCAGCGCAA CTTCACCCCG
CACCTGGCGA TCCAGGGCGA TGCTCGCGTG GCCATGCGCA TGCTGCTGGC CGAGTTCAAC
CCCGGCGAAC CCCGTGCGGA CAGCCCCGGC GCACGGCGCA CCGCCGCCGT GCAGGCACGC
CTGAACGAGG ACTTCAGCGG CTGGGCGCAT TACCGCCAGC TGTTCGACTG CATCCTGGAT
GCCCTGCCCG ATGCCCGCTT CGTCGGCGAC TCGACGCAGA CCGTGTACAG CGGCAATCAC
CTGGTGGAGC TGGACGGCGC GCGGCGCTGG TTCAACGCCT CCACCGGCTA CGGCACCCTC
GGCTACGGCC TGCCGGCGGC CATCGGCGCC AAGCTGGCCG AGCCGCAGCG CCCGGTGATC
AGCCTGATGG GCGACGGCGG CATCCAGTTC ACCCTGCCCG AGCTGGCCAG CGCCGTGGAA
GCGCGGGTCG GCATCGTCGT GCTGCTGTGG AACAACGCCG GCTACGGCGA GATCAAGCGC
TACATGCAGC GCCGCGACAT CGAGCCTATC GGCGTCGACA TCTACACCCC GGACCTGCTG
GCCATCGCCC GCGGCTTCGG CTGCGCAGCC GAACGAGCAC GCGACCATGC GCATCTGGCC
GAACTGCTGC GCAGCGCGCC GCAGGATCGC CCGCTGATCA TCGAAGTGCA GGAGGCCGCG
CCCTTTCATC CCTGA
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| Protein sequence | MRVFLSTQDL TMTTCGEFLV KQLEAWGVDT VFGIPGVHTV ELYRGLPGSG IRHITPRHEQ
GAGFMADGYA RVSGKPGVCF IITGPGMTNI LTAMGQAYAD SIPMLVISSV NERARLGLGK
GYLHELPNQR AMTAGVTAFS HTLMSVEELP GVLARAFAVF EGERPRPVHI ELPLDIITAE
ATHMAVAPRP TVRRPAPNRT LIREAAGLLK QAERPLLLLG GGCVAAEAEA RALAAALDTP
TALTINAKGL LPPGHPLLLG SNQSLRPVRD LALEADLVLA IGTELGETDY DVVFDGDFRL
PGRLIRIDID AQQLQRNFTP HLAIQGDARV AMRMLLAEFN PGEPRADSPG ARRTAAVQAR
LNEDFSGWAH YRQLFDCILD ALPDARFVGD STQTVYSGNH LVELDGARRW FNASTGYGTL
GYGLPAAIGA KLAEPQRPVI SLMGDGGIQF TLPELASAVE ARVGIVVLLW NNAGYGEIKR
YMQRRDIEPI GVDIYTPDLL AIARGFGCAA ERARDHAHLA ELLRSAPQDR PLIIEVQEAA
PFHP
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