Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1772 |
Symbol | |
ID | 5109352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1946851 |
End bp | 1947915 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503004 |
Product | gluconolactonase |
Protein accession | YP_001187268 |
Protein GI | 146306803 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.338727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.409264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA AACTGCTTGC CCTGCTCGTC GTGCTGCTGG CCGCCGCGGC AGGTTATCTG GCGCTGACGC CGAGCCCCAT CGATCCGCTG CCCTGGGACG CCGCGCCCGC ACCGGCGATG ACCGGCGTGC TGGAAGCCAA CGACACCCTG ATGAAGGCCG AGCTGCTCGC CCGCGGCCAG GTCCATGGCC CCGAGGATAC CGCCGTGGAT GGCGAGGGCC GGGTCTATGC TGGCCTGCAC GACGGGCGCA TCGTCCGCGT GCTGGCCGAT GACAGCGTGG AGACCTTCGT CGACACCGGC GGCCGCCCGT TGGGCATGAA CTTCGATGCC GCTGGCAACC TGATCGTCGC CGACGCTTAC AAGGGTCTGC TGAGCATCGA CCCGCATGGC GCAATCACGG TGCTCACCAC CGAGGCCGAC GGCGTGCCGT TCGCCTTCAC CGACGATCTG GATATTGCCA GCGACGGCAC CATCTATTTC AGCGACGCGT CCTCGCGCTT CCAGCAACCG GACTACCTGC TCGACCTGCT CGAAGCGCGC CCGCACGGCC GCCTGCTGGC CTATGACCCG GCCAGTGGCG AAACCCGCGT ACTGCTCGAC GGCCTGTACT TCGCCAACGG TGTGGCGCTG TCGGCGAACG AAGACTTCGT GCTGGTCAAC GAGACCTATC GCTATCGCAT CACCCGCTAC TGGCTCAAGG GCGACAAGGC CGGCCAGCAC GACATCTTCA TCGACAACCT GCCCGGTCTG CCGGACAACC TGCAGGGCGA CCGCAACGGC ACCTTCTGGG TTGCCCTGCC CACACCGCGC AAGGCCGACG CCGATTTTCT CCACCGCCAC CCCTGGCTCA AGGCGCAACT GGCCAAGCTG CCGCGCGCGC TGTGGCCCAA GGCGATCCCC TACGGCTTCG CCATCGCCCT CAACGAGCAG GGTGAGATCG TGCGCAGCCT GCACGACACC AGCGGTACCC ACCTGCGCAT GATCACCTCG GTGAAACCGG TGGGCGACCA TCTGTATTTC GGCAGCCTGG ACAACGACCG CATCGGCCGT CTCGAACTGC ACTGA
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Protein sequence | MLKKLLALLV VLLAAAAGYL ALTPSPIDPL PWDAAPAPAM TGVLEANDTL MKAELLARGQ VHGPEDTAVD GEGRVYAGLH DGRIVRVLAD DSVETFVDTG GRPLGMNFDA AGNLIVADAY KGLLSIDPHG AITVLTTEAD GVPFAFTDDL DIASDGTIYF SDASSRFQQP DYLLDLLEAR PHGRLLAYDP ASGETRVLLD GLYFANGVAL SANEDFVLVN ETYRYRITRY WLKGDKAGQH DIFIDNLPGL PDNLQGDRNG TFWVALPTPR KADADFLHRH PWLKAQLAKL PRALWPKAIP YGFAIALNEQ GEIVRSLHDT SGTHLRMITS VKPVGDHLYF GSLDNDRIGR LELH
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