Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1771 |
Symbol | |
ID | 5109351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1945464 |
End bp | 1946801 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503003 |
Product | glutamate dehydrogenase |
Protein accession | YP_001187267 |
Protein GI | 146306802 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.89155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.439156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTGT CCGTCGATTC TTTCCTGGCG CGCCTGAAAC AGCGCGATCC CGATCAGCCG GAGTTCCACC AGGCGGTGGA AGAGGTGGTG CGCAGCCTCT GGCCCTTTCT CGAGGCCAAC CCGCGTTACC GCGATGCCGG TATTCTCGAG CGTATGGTCG AGCCGGAACG CGCCATCCTG TTTCGCGTGC CCTGGGTCGA CGACCGCGGC CAGGTGCAGG TCAACCGCGG CTACCGCATC CAGATGAGCA GCGCTATCGG CCCCTACAAG GGTGGCCTGC GCTTCCATCC CTCGGTGAAC CTGGGCGTGC TCAAGTTCCT CGCCTTCGAA CAGGTGTTCA AGAATTCGCT GACCTCGCTG CCCATGGGCG GTGGCAAGGG CGGCTCGGAC TTCGACCCCA AGGGCAAGAG CGAGGGCGAG GTGATGCGCT TCTGCCAGTC GTTCATGAGC GAGCTGTACC GTCATATCGG TGCCGACCTG GACGTGCCGG CCGGTGACAT CGGCGTCGGT GGCCGCGAGA TCGGCTACCT GTTCGGCCAG TACAAGCGCC TGTCCAACCA GTTCACCTCG GTGCTCACCG GCAAGGGCCT GAGCTACGGC GGCAGCCTGA TCCGCCCGGA AGCCACCGGT TATGGCTGCG TGTACTTCGC CCAAGAGATG CTCAAGCGCA TCGACCAGGG CTTCGAGGAC AAGCGCGTGG CCATCTCCGG CTCCGGCAAC GTCGCCCAGT ACGCGGCGCA GAAGGTCATG GAACTGGGCG GGCGGGTCAT TTCACTGTCC GATTCCGACG GCACCCTGTA TGCCGAAGGC GGCCTGAGCA ACGAGCAGTG GCTGCATGTG ATGGACCTGA AGAACGTGCG TCGCGGCCGC CTGCGCGAGA TGGCCGAGCA CTATGGTCTG CAGTTCCTTG CCGGCCAGCG CCCCTGGAAC CTGCCGTGCG ACATCGCGCT GCCCTGCGCC ACGCAGAACG AGCTGGATGG CGAGAACGCC CGCACGCTGT TGAACAACGG CTGTATCTGC GTGGCCGAGG GGGCCAACAT GCCCTCCACG CTGGAAGCGG TGGATTTGTT CGTCGAGGCC GGCATCTGCT ACGCGCCGGG CAAGGCGTCC AATGCCGGCG GCGTGGCCAC CAGCGGCCTG GAAATGAGCC AGAACGCCAT GCGTCTGCAC TGGAGCGCCG GCGAGGTGGA CGAGCGCCTG CACGGCATCA TGCAGAACAT CCACCACGCC TGCGTGCACC ATGGCGAGGA GAAGGGGCGA GTCAACTACG TCAAGGGCGC CAACATCGCC GGCTTCGTCA AGGTCGCCGA TGCCATGCTG GCCCAGGGCG TGGTCTGA
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Protein sequence | MSLSVDSFLA RLKQRDPDQP EFHQAVEEVV RSLWPFLEAN PRYRDAGILE RMVEPERAIL FRVPWVDDRG QVQVNRGYRI QMSSAIGPYK GGLRFHPSVN LGVLKFLAFE QVFKNSLTSL PMGGGKGGSD FDPKGKSEGE VMRFCQSFMS ELYRHIGADL DVPAGDIGVG GREIGYLFGQ YKRLSNQFTS VLTGKGLSYG GSLIRPEATG YGCVYFAQEM LKRIDQGFED KRVAISGSGN VAQYAAQKVM ELGGRVISLS DSDGTLYAEG GLSNEQWLHV MDLKNVRRGR LREMAEHYGL QFLAGQRPWN LPCDIALPCA TQNELDGENA RTLLNNGCIC VAEGANMPST LEAVDLFVEA GICYAPGKAS NAGGVATSGL EMSQNAMRLH WSAGEVDERL HGIMQNIHHA CVHHGEEKGR VNYVKGANIA GFVKVADAML AQGVV
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