| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1754 |
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| Symbol | |
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| ID | 5109334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1928964 |
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| End bp | 1929974 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640502986 |
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| Product | threonine-phosphate decarboxylase |
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| Protein accession | YP_001187250 |
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| Protein GI | 146306785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGAAC ACGGAGGTCG ACTGCGCGCG GCGGCGCAGC GCTATGGCAT CCCCCTGGAG
GACTGGCTGG ACCTGTCCAC CGGTATCGCC CCCTATGGCT GGGATCTGCC GCCGGTTCCC
GCTCAGGCCT GGGCGCGGTT GCCCGAGATC AACGATGGCC TGGAGGCGGC CGCGCGCGAT
TATTACGGCG CCGCCAGCCT GTTGCCGGTG GCCGGTTCGC AGGCGGCGAT CCAGGCTCTG
CCACGCCTGC GCACGCACAG CAACGTGGGC ATCCTCGCGC CGACCTACGC CGAGCACGCC
GCGGCCTGGC GCCGCGAAGG CCATCGCATC ACCAAGCTCA GCGAGGGTTC GGTGCATCGC
GCGCTGCCGC AGCTCGACGT GCTGCTGGTG GTCAATCCCA ACAACCCGAC CGGGCGCCTG
ATCGAGCCGG CGCGCCTGCT CGACTGGCAC GACGAGCTGG CCGAGCGCGG CGGCTGGCTG
GTGGTCGACG AAGCCTTCAT CGACTGCACG CCGCAGCACA GCCTGGCGGC CTACAGCGAC
ATGCCGGGGC TGATCGTGCT GCGTTCGTTC GGCAAGTTCT TCGGTCTGGC CGGCCTGCGT
CTGGGCTTCG TGCTGGCGGC GCAGGCCTTG CTGGATGAGC TGGACGCGCT GCTCGGTCCC
TGGGCGGTCA GCGGTCCGGC GCGCAGCCTC GCCCGCCATC TGCTTGCTGA CAGCGACGGC
CAGCGCCGCC AGCGCGAACG TTTGCTGGCC GATGGCGAGC GCCTGGCGGC GCTGCTGCGC
GACTGCGGCC TGCCGCCTAC CGGCGGTTCG GCGCTGTTCC AGTTCTGCTG TACGCGCCGT
GCGGTGCCCT GCATGGAGCT GCTGGCACGG CGCGGCATTC TGATCAGGCT GTTCGCCGAG
CTGGACAGCC TGCGCTTCGG CCTGCCGGCA GACGAGGCCG GCTGGCTGCG CCTGGAGCAG
GGCTTGATGG ACTGCGCGCC GATCCTCGCC AGCCTTGAGG AAACCTCCTG A
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| Protein sequence | MLEHGGRLRA AAQRYGIPLE DWLDLSTGIA PYGWDLPPVP AQAWARLPEI NDGLEAAARD
YYGAASLLPV AGSQAAIQAL PRLRTHSNVG ILAPTYAEHA AAWRREGHRI TKLSEGSVHR
ALPQLDVLLV VNPNNPTGRL IEPARLLDWH DELAERGGWL VVDEAFIDCT PQHSLAAYSD
MPGLIVLRSF GKFFGLAGLR LGFVLAAQAL LDELDALLGP WAVSGPARSL ARHLLADSDG
QRRQRERLLA DGERLAALLR DCGLPPTGGS ALFQFCCTRR AVPCMELLAR RGILIRLFAE
LDSLRFGLPA DEAGWLRLEQ GLMDCAPILA SLEETS
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