| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1720 |
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| Symbol | |
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| ID | 5109300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1893245 |
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| End bp | 1895026 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502951 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187216 |
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| Protein GI | 146306751 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00248368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.287373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTAA ACGTGCGGAC TTTAAATAAG TCCCCCTATC TTTTATTGCC ACTGAGTTGC
CTGATCGGCT CGGCAACGGC GGCGAACTTC CAGTTCGGCG AGTTCGAAGG CCAGCTGGAT
TCCTCACTGT GGATCGGCAC CAGCATCGCC ACGTCCAATC CGGACCCCAA GCTGATGCGC
AGCGCCAGCG GCGACGACGG TCGACGCAAC TTCGGCGCTG GCGACGCCTT TTCCGGACTG
TTCAAGGGCA CCCACGACCT GGAACTGCGC CATGGCGACT TCGGCGCCTT CCTGCGCGGC
AGCTACTGGT ACGACTATGT GCTGCGTGAT CGCGAACAGC CCTTCAAGGA CGTGGTCGAC
AACAATCGCA AGCGCTCGGC GAAATCGGCC GGCGCAGAGC TGCTGGACGC CTTCGTCTAC
TACAACTATG CCCTCGCCGA TCAACCCGGC TCCGCACGTC TGGGCAAGCA GGTGGTCAAC
TGGGGCGAGA GCACCTTCAT TCAGGGTGGC CTCAACACGG TCAACCCCTA CAACCTGTCG
GCATTGCGCC GGCCGGGTGC CGAGGTCAAG GAAGGCCTGG TGCCGGTGAA CATGTTCTAT
CTGTCGCAGA ACCTCAGCGA AGCGCTTTCC GGCGACTTCT TCTACCAGCT GGACTGGGAA
CAGACCCAGC TCGACAACTG CGGCACCTTC TTTTCCAGCA GCGACTTCCT GGCCGATGGC
TGCGACGGTC TGGACGTCGG CGCGGTGCTC ACCGGCAATC CTGCGGCAGT TGCAGCGCTG
GCCCCCTTCG AGGTCAATCT CACCGACGAG GGCATCCGCA TTCCGCGCGC CAAGGATCAG
GACGCACGCA ACGGCGGGCA ATGGGGCCTT TCGCTGCGCT GGTTCGCCGC CGAACTGGAT
ACGGAGTTCG GCGCCTTCGT CGCCAACTAC CACAGCCGCC TGCCCTACAT GGGCACCATC
AGCAGCCCCT ACTACAACAG CACGGTGTTC GGCCCAACAC TCAACGGCGC CCTGCGCCTC
GGCACCTCGC AGTACGTGGT GCAGTACCCT GAAGACATCC GTCTGTACGG CCTTACCTTC
GCCACCAACC TGTCCACCGG GACGGCGCTG CAGGGCGAGA TCAGCTACCG GCCGAACATG
CCGATCCAGC TCAACGGCAC CGATATCATC CAGTCGCTGC TCAATGCCCC GGCGCGCTCG
CCACTGGTGG CACAGGGCAT CCGCCCCAAC GCACCTAACA CGCTGTTCAA TGGCTACCGG
CGCAAGGAGG TGACCCAGGC CCAGGTCACG GCCACCCACT CCTTCAGCCA GGTCATGGGT
GCCGATCAGC TGGTGCTGAT CGGCGAACTC GGCGGCACCT GGGTCGGCGG CCTGGAAGGC
AAGTTCGGCC CGCGCTACGG GCGCAACGGC ACCTTCGGCA ACGGCATCCT CGCCAGTGGC
GCCTGCGCGT CCATCTCGCA AACACCCGAG CACTGCAACG ACGAAGGCTT CCTCACGCCA
TTCTCCTGGG GCTACCGGGT ACGTGCCACC TGGAGCTATG CCAACGCCGT CGCCGGCATC
GACCTGCGTC CCAGTCTGTC CTGGCAGCAC GATGTCGACG GCAACGGCCC CGGCGAAGGC
TCGGCTTTCA GCGAAGGCTC CAGGGCCATC AGCGTCGGCC TCGATGCCAC GCTGAACAAC
ACCTACAACG CCAGCCTGGC GTACACCAAC TACATGGATG GTGACTACGG CACCCGTGGC
GATCGCGACT TCGTCTCGAT CAGCCTGGGC GTCAATTTCT AA
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| Protein sequence | MRLNVRTLNK SPYLLLPLSC LIGSATAANF QFGEFEGQLD SSLWIGTSIA TSNPDPKLMR
SASGDDGRRN FGAGDAFSGL FKGTHDLELR HGDFGAFLRG SYWYDYVLRD REQPFKDVVD
NNRKRSAKSA GAELLDAFVY YNYALADQPG SARLGKQVVN WGESTFIQGG LNTVNPYNLS
ALRRPGAEVK EGLVPVNMFY LSQNLSEALS GDFFYQLDWE QTQLDNCGTF FSSSDFLADG
CDGLDVGAVL TGNPAAVAAL APFEVNLTDE GIRIPRAKDQ DARNGGQWGL SLRWFAAELD
TEFGAFVANY HSRLPYMGTI SSPYYNSTVF GPTLNGALRL GTSQYVVQYP EDIRLYGLTF
ATNLSTGTAL QGEISYRPNM PIQLNGTDII QSLLNAPARS PLVAQGIRPN APNTLFNGYR
RKEVTQAQVT ATHSFSQVMG ADQLVLIGEL GGTWVGGLEG KFGPRYGRNG TFGNGILASG
ACASISQTPE HCNDEGFLTP FSWGYRVRAT WSYANAVAGI DLRPSLSWQH DVDGNGPGEG
SAFSEGSRAI SVGLDATLNN TYNASLAYTN YMDGDYGTRG DRDFVSISLG VNF
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