Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1699 |
Symbol | |
ID | 5109673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1868907 |
End bp | 1869557 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502928 |
Product | maleylacetoacetate isomerase |
Protein accession | YP_001187195 |
Protein GI | 146306730 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.124375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAC TCTACGGCTA CTGGCGCTCC AGCGCCGCCT ACCGCGTGCG TATCGCCCTG AACCTCAAGG GCCTGGCCTA CCAGCAGGTG CCGGTGCACC TGGTCAAGGA TGGTGGGCAG CAGCACGGCG CCGACTACCG CACGCTGAAC CCGCAGGGGT TGCTGCCGCT GCTGGTGGAC GAGGAGAACG GCGGCGTACG CATCGCCCAG TCCCTGGCGA TCATCGAATA CCTCGAGGAA ATCTTCCCGG TACCGGCGCT GCTGCCGGCC GATCCGGCCG AGCGCGCCCA GGTGCGGGCG CTGGCGCTGC ACATTGCCTG CGACGTGCAT CCGCTGAACA ACCTGCGCGT GCTGCAGTAC CTGTCCAGCG ACCTGGGCGC CTCCGACGAG GCGAAGAACG CCTGGTACAG GCACTGGGTC GGCCTCGGCC TGGCGGCGGT GGAAGAGGGG CTGGCGGCCT TCGACGGTCG TCTGTCGCTT GGCGAGCGGC CGGGATATCT GGAAGCCTGT CTGATCCCGC AGCTGTATAA TGCGCGGCGT TTTAACTGTG ACCTTGCCGC GTACCCACGC ATTCTCGCCC TGGCGGCGCG CTGCGAACCC CTGCAGGCCT TCCAACAGGC CGCGCCGGAG GTGCAGCCCG ACGCTCAGTG A
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Protein sequence | MLKLYGYWRS SAAYRVRIAL NLKGLAYQQV PVHLVKDGGQ QHGADYRTLN PQGLLPLLVD EENGGVRIAQ SLAIIEYLEE IFPVPALLPA DPAERAQVRA LALHIACDVH PLNNLRVLQY LSSDLGASDE AKNAWYRHWV GLGLAAVEEG LAAFDGRLSL GERPGYLEAC LIPQLYNARR FNCDLAAYPR ILALAARCEP LQAFQQAAPE VQPDAQ
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