| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1696 |
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| Symbol | |
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| ID | 5109670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1865418 |
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| End bp | 1866500 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502925 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001187192 |
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| Protein GI | 146306727 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.141185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG TGGCCAAGAT CGAGCAGCAC AACCCCATCG GAACCGACGG TTTCGAGTTC
GTCGAATTCA CCGCACCGAC CGCCGAAGGC ATCGAGCAAC TGCGCCAGTT GTTCACCGCC
ATGGGCTTTA CCGAAACCGC CAAGCACCGC TCGAAAGAGG TGTGGCTGTT CCAGCAGAAC
GACATCAACA TCGTGCTCAA CGGCAGCCCC ACCGGGCACG TGCGCGCCTT CGGCGAGAAG
CACGGCCCCA GCGCCTGCGC CATGGCGTTC CGGGTCAAGA ACGCCGCCCA GGCCGCGGCC
TACGTCGAGC AGCAGGGCGC CAAGCTGGTG GGCAGCCACG CCAATTTCGG CGAGCTGAAC
ATTCCCTGCG TCGAAGGCAT CGGCGGCTCG CTGCTGTATC TGGTTGACCG CTATGGCGAC
AAGACCATCT ACGACGTCGA CTTCGAGTAC ATCGAAGGCC GCAGTGCCAA CGACAACGCC
GTCGGCCTGC AGTGCATCGA CCACCTGACC CATAACGTGC GCCGCGGACA GATGGACGTA
TGGTCCGGCT TCTACGAGCG CATCGCCAAC TTCCGCGAGA TCCGCTACTT CGACATCGAA
GGCAAGCTCA CCGGCCTGTT CTCCCGCGCC ATGACCGCGC CGTGCGGCAA GATCCGCATC
CCGATCAATG AGTCGGCCGA TGACAAGTCG CAGATCGAGG AATTCATCCG CGAGTACCAC
GGCGAGGGCA TTCAGCACAT CGCCCTGTCC ACCGACGACA TCTACGCCAC CGTGCGCCAG
CTGCGCGCCA ACGGCGTGGA CTTCATGACC ACCCCGGACA CCTATTATGA AAAGGTCGAC
AGCCGCGTCG CCGGCCATGG CGAGCCGACC GATGTGCTGC GCGAGCTGAA CATCCTGATC
GACGGAGCGC CGGGCGACGA CGGCATCCTG CTGCAGATCT TCACCAACAC GGTGATCGGC
CCGATCTTCT TCGAGATCAT CCAGCGCAAG GGCAATCAGG GTTTCGGCGA GGGCAACTTC
AAGGCGCTGT TCGAGTCGAT CGAGGAAGAC CAGCTGCGTC GCGGTGTGAT CTCCGAGGAG
TGA
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| Protein sequence | MNAVAKIEQH NPIGTDGFEF VEFTAPTAEG IEQLRQLFTA MGFTETAKHR SKEVWLFQQN
DINIVLNGSP TGHVRAFGEK HGPSACAMAF RVKNAAQAAA YVEQQGAKLV GSHANFGELN
IPCVEGIGGS LLYLVDRYGD KTIYDVDFEY IEGRSANDNA VGLQCIDHLT HNVRRGQMDV
WSGFYERIAN FREIRYFDIE GKLTGLFSRA MTAPCGKIRI PINESADDKS QIEEFIREYH
GEGIQHIALS TDDIYATVRQ LRANGVDFMT TPDTYYEKVD SRVAGHGEPT DVLRELNILI
DGAPGDDGIL LQIFTNTVIG PIFFEIIQRK GNQGFGEGNF KALFESIEED QLRRGVISEE
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