| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1693 |
|---|
| Symbol | |
|---|
| ID | 5109667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1861714 |
|---|
| End bp | 1862652 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640502922 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001187189 |
|---|
| Protein GI | 146306724 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.782277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.169861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA AGATCGTCGT CGCGGCGCTG TATAAATTCG TCTCCCTGCC GGACTACCAG
GCGCTACGCG AACCCCTGCT GCAAACCCTG CTCGACAACG GCATCAAGGG CACCCTGCTG
CTCGCCGAAG AGGGCATCAA CGGCACCGTG TCCGGCAGCC GCGCCGCCAT CGATGCGCTG
CTCGCCTGGT TCCGCCAGGA CGCCCGCCTG GCCGATATCG ACCACAAGGA ATCCTACTGC
GATGAGCAGC CGTTCTATCG CACCAAGGTC AAGCTGAAGA AGGAGATCGT CACCCTCGGC
GTGCCGGGCG TCGATCCCAA CCAGCGCGTC GGTACCTACG TCGAACCGCA GGACTGGAAC
GCCCTGATCA GTGACCCAGA GGTGCTGCTG ATCGACACGC GCAACGACTA CGAGGTGGCC
ATCGGCACCT TCGAGGGCGC CATCGACCCC AAGACCAAGT CGTTCCGCGA GTTCCCCGAG
TACGTCAAGG CCCACTTCGA TCCGAGCAAG CACAAGAAGG TGGCGATGTT CTGCACCGGT
GGCATCCGCT GCGAGAAAGC CTCCAGCTAC ATGCTCGGCG AGGGGTTCGA GGAGGTCTAT
CACCTCAAGG GCGGCATCCT CAAATACCTC GAGGAAGTGC CGCAGGAGCA GACCAAGTGG
CGCGGCGACT GCTTCGTCTT CGACAACCGC GTGACGGTGC GCCACGACCT GTCCGAAGGC
GACTACGATC AGTGCCACGC CTGCCGCAAT CCGATTTCCG TGGAAGATCG CCAGTCCGAG
TACTACAGCC CCGGCGTCAG TTGCCCGCAT TGCTGGGATT CGCTGCCGGA GAAGACCCGT
GAAAGCGCCC GCGAGCGGCA GAAGCAGATC GAGCTGGCCC GTGCGCGCAA CCAGCCGCAC
CCCATCGGCC GCGACCCCCG CCAACTGAAC GAGGCCTGA
|
|---|
| Protein sequence | MTDKIVVAAL YKFVSLPDYQ ALREPLLQTL LDNGIKGTLL LAEEGINGTV SGSRAAIDAL
LAWFRQDARL ADIDHKESYC DEQPFYRTKV KLKKEIVTLG VPGVDPNQRV GTYVEPQDWN
ALISDPEVLL IDTRNDYEVA IGTFEGAIDP KTKSFREFPE YVKAHFDPSK HKKVAMFCTG
GIRCEKASSY MLGEGFEEVY HLKGGILKYL EEVPQEQTKW RGDCFVFDNR VTVRHDLSEG
DYDQCHACRN PISVEDRQSE YYSPGVSCPH CWDSLPEKTR ESARERQKQI ELARARNQPH
PIGRDPRQLN EA
|
|---|
| |