| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1658 |
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| Symbol | |
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| ID | 5109632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1820353 |
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| End bp | 1821786 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502886 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_001187154 |
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| Protein GI | 146306689 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.782843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTC TGCGCCCCAC CCTGCTGACG CTCGCCTGCC TGTTCGCCGC CCACACGGGT
GCCAGTGACC TGCCGTCGCT GGGCGACGCC AGTTCATCGA TCGTCTCGCC GCAACAGGAG
CATCAGCTCG GCCGCGCCTG GCTCGGCCTG CTCCGCGGCC AGGTGTCCCA GCTGGACGAC
CCGCAGCTCA AGGACTTCGT CGAATCCAGC GTCTACCGCC TGGCGGAAAC CAGCCAGCTG
CAGGACCGCC GCCTGGAATT CGTGCTGCTC AACAGCCCGC AGCTGAACGC CTTCGCCGCA
CCAGGCGGCA TCGTCGGGGT CAATGGCGGC CTGTTCCTCT ATGCCCAGAC CGAAGCCGAG
TACGCCTCGG TGATGGCGCA CGAACTGGCG CACTTGTCGC AGCGCCACTT CGCCCGCGGC
GTCGAGGCCC AGCAGCGCAT GCAACTGCCG GTGATGGCCG CCATGCTCGC CGGCATCGTC
GCCGCCGCGG CAGGCGCCGG CGATGCCGGC ATGGCCACCA TCTTCTCCGC CCAGGCCGCC
GCGATTCAGG AGCAACGGCG CTTCTCCCGG CAGAACGAAC AGGAGGCCGA CCGCATCGGC
CTGGTCAACC TGGAAAAGGC CGGCTACGAC CCACGCGCCA TGCCGATGAT GTTCGAACGG
CTGATGCGCC AGTACCGCTA CGACGCCAAG CCGCCGGAGT TCCTGCTGAC TCACCCGGTG
TCCGAATCGC GTATCGCCGA CACCCGCAAC CGTGCCGAGC AGTACCCGGC CAAGGGCCGC
GAAGACAGCC TGCGCTACCA GCTGATGCGC GCCCGCGTGC AGCTGACCTA CGAGGAAACC
GCGGGGGTGG CGGCCAAGCG CTTCCGCGCC ATGCTCGACG AAAACCCGGG CCTGGACGCC
GCCCGCTACG GCCTGGTGCT GGCGCAGATG AAAACCGGCC AGCTTGGCGA AGCCGCGCAG
ACCCTGGCCC CGCTGCTGAG CAAGGCGCCG GATGACATCG TCTACAACCT GGCGCAGATC
GAGCTGGACA TGGCCGCCAA CCGCCTGGAT GCCGCCGAGC GCCGGCAGGA GCGCATGTTC
ACCCTCTACC CCAGCAACTA CCCGCTGCAG CAAACGCGCA TCGACCTGTT GCTCAAGCAG
CAGCGCACCC GCGACGCCGA ACGCGCGCTG GACAACCTGC TCAAGAGCCG ACCGAAGGAT
CCGGACGTCT GGTATCAGGT CGCCGAGGTA CGCGGCCTGA GCGGCAACAC CGTCGGCCTG
CACCAGGCCC GCGCCGAGTT CTTCGCTCTG GTGGGGGACT ACAACCAGGC CATCGAACAG
CTCGACTTCG CCAAGCGCCG CGCCAGCAAC AACTTCCAGA TGGCCTCGCG CATCGACGCG
CGCCAGCGCG AACTGGCCGA AGAGAAACGT CTGGTGGAGC AGATGCTGCG CTGA
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| Protein sequence | MTFLRPTLLT LACLFAAHTG ASDLPSLGDA SSSIVSPQQE HQLGRAWLGL LRGQVSQLDD
PQLKDFVESS VYRLAETSQL QDRRLEFVLL NSPQLNAFAA PGGIVGVNGG LFLYAQTEAE
YASVMAHELA HLSQRHFARG VEAQQRMQLP VMAAMLAGIV AAAAGAGDAG MATIFSAQAA
AIQEQRRFSR QNEQEADRIG LVNLEKAGYD PRAMPMMFER LMRQYRYDAK PPEFLLTHPV
SESRIADTRN RAEQYPAKGR EDSLRYQLMR ARVQLTYEET AGVAAKRFRA MLDENPGLDA
ARYGLVLAQM KTGQLGEAAQ TLAPLLSKAP DDIVYNLAQI ELDMAANRLD AAERRQERMF
TLYPSNYPLQ QTRIDLLLKQ QRTRDAERAL DNLLKSRPKD PDVWYQVAEV RGLSGNTVGL
HQARAEFFAL VGDYNQAIEQ LDFAKRRASN NFQMASRIDA RQRELAEEKR LVEQMLR
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