| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1609 |
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| Symbol | |
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| ID | 5109267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1772974 |
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| End bp | 1774218 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502837 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001187105 |
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| Protein GI | 146306640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0146346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0646675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGTC CGCTGAGTAT CTTCATCGGC GCTCGCTACA CACGGGCCAA GCGCCGCAAC
CATTTCATCT CCTTCATTTC GCTGACTTCG ATGATCGGTC TGGCACTCGG CGTGCTGGCG
ATGATCGTGG TGCTGTCGGT GATGAACGGC TTCCAGAAGG AAATGAGCTC GCGCATTCTC
GGCATGGTGC CGCACGCCAT GCTCTATGGT GCCGAGCCGG TTGCCGACTG GCGCGCCCTG
GCGGCAAAGG CCATGGCCAA TCCGCAGGTG CAGGCAGCTG CGCCTTATGC CGAGCTGGAG
GGCATGCTTT CGCATCGCGG CACGATGCAG CCGATCCAGA TCCACGGTAT TGATCCGGCC
GAGGAGGGCA AGGTGTCGAT CCTGCCCGAG CATATCCGTC AGGGCAGCCT GAACAATCTG
CAGCCCGGTG AGTTCGGCGT GGTGATCGGT GATATCACCG CGCGTCGTTT TGGCCTGCAG
GTGGGCGATA AGCTGACGCT GATCATTCCC GAGCTGAGCA GTGCACCTGG TGGCGTCACC
CCGCGCATGC AGCGGCTGAA CGTGGCAGCG GTATTCAAGG TCGGCGCCGA GTTGGACAGC
TCGCTGGCGC TGATCAACGT CGCCGATGCG GCAGCGATGC AGCGCCTGCC GGAGGGCACT
GTGCCGGGCA TTCGCCTGGC GCTGAAGGAC CTGTATCAGG CGCCGCAGGT GTCCAAGGCG
CTGCAGGCGC AGCTGGGCGC CGATTACCGT GCCGACGACT GGACCCACAC CCAGGGCAGC
CTGTTCAGCG CGATGAAGAT GGAGAAGACC ATGATCGGTC TGCTGCTCTT GCTGATCGTC
GCGGTGGCAG CCTTCAATAT CATCGCCACG CTGATCATGG TGGTCGCCGA CAAGGGCGGC
GATATCGCCA TCCTGCGTAC GCTGGGCGCC ACACCACGTC AGATCATGGC CATCTTCATG
GTGCAGGGCT CGGTGATCGG CCTCGTCGGC ACCCTGATCG GCACGGTATT CGGCTTGCTT
GCGGCGCTGA ATGTCAGTGC ACTGGTGGCC TGGCTGGAAT CCTTCGCCGG ACAGCAGGTG
CTGAGCTCCG ACGTGTACTT CATCAGCAGC CTGCCATCGG ACCTGCAGTG GCTGGATGTG
GTGCTGATCT GTTCGGCGGC ATTGATTCTG AGCTTCCTCG CCACGCTCTA CCCATCCTGG
CGGGCAGCGC AAGTACAGCC AGCCGAAGCG CTACGTTACG AGTAA
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| Protein sequence | MFRPLSIFIG ARYTRAKRRN HFISFISLTS MIGLALGVLA MIVVLSVMNG FQKEMSSRIL
GMVPHAMLYG AEPVADWRAL AAKAMANPQV QAAAPYAELE GMLSHRGTMQ PIQIHGIDPA
EEGKVSILPE HIRQGSLNNL QPGEFGVVIG DITARRFGLQ VGDKLTLIIP ELSSAPGGVT
PRMQRLNVAA VFKVGAELDS SLALINVADA AAMQRLPEGT VPGIRLALKD LYQAPQVSKA
LQAQLGADYR ADDWTHTQGS LFSAMKMEKT MIGLLLLLIV AVAAFNIIAT LIMVVADKGG
DIAILRTLGA TPRQIMAIFM VQGSVIGLVG TLIGTVFGLL AALNVSALVA WLESFAGQQV
LSSDVYFISS LPSDLQWLDV VLICSAALIL SFLATLYPSW RAAQVQPAEA LRYE
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