| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1608 |
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| Symbol | |
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| ID | 5109266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1772261 |
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| End bp | 1772974 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502836 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_001187104 |
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| Protein GI | 146306639 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.109115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0760989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAGT CCATGAACCC GAACGCCATG AAACAGCACA ATGCCGTGCT CAGCTGCCGC
AACCTGAGCA AGCGTTACGA CGAAGGCCCC GAGTCGGTGG TGGTGCTCGA CGGGCTCGAA
CTGGAACTGC TGCCCGGTGA GCGCGTGGCC ATCGTCGGCA GCTCCGGCTC CGGCAAGAGC
ACCCTGCTGA ACATGCTCGG CGGCCTGGAT ACGCCCAGTG CAGGCAGCGT GTGGCTGGCC
GGCGAGCAAC TGTCGGCGCT GAGCGAAACC GCCCGTGGCC TGTTGCGCAA CCGTGCACTG
GGCTTCGTTT ATCAGTTTCA TCATCTGCTG GCCGAATTTA CCGCGCTGGA AAATGCCTGC
ATGCCGCTGC TGATCGGCAA GACGCCGATT GCCGAAGCGC GCCAGCGTGC GACCGCTCTG
CTGGAGCGAG TCGGCCTGGG CCATCGCCTG CACCACAAAC CGGCTGAACT GTCCGGTGGT
GAGCGTCAGC GCGTAGCCAT TGCCCGTGCC CTGGTCAACC GCCCCGGGCT GGTGCTGCTC
GATGAGCCCA CCGGCAACCT CGATCAGCAC ACTGCCGAAG GCATTCAGGA GCTGATGCGC
GAACTGAGCC GCGACTCCAA TACCGCATTT CTGGTGGTGA CTCACGACAT GCAGCTGGCG
CGCCAGATGG ATCGCGTGCT CAGCCTGCAG GACGGCAAGC TGGTGGCCCT CTAA
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| Protein sequence | MSESMNPNAM KQHNAVLSCR NLSKRYDEGP ESVVVLDGLE LELLPGERVA IVGSSGSGKS
TLLNMLGGLD TPSAGSVWLA GEQLSALSET ARGLLRNRAL GFVYQFHHLL AEFTALENAC
MPLLIGKTPI AEARQRATAL LERVGLGHRL HHKPAELSGG ERQRVAIARA LVNRPGLVLL
DEPTGNLDQH TAEGIQELMR ELSRDSNTAF LVVTHDMQLA RQMDRVLSLQ DGKLVAL
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