| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1603 |
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| Symbol | |
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| ID | 5109261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1767457 |
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| End bp | 1768851 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502831 |
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| Product | soluble pyridine nucleotide transhydrogenase |
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| Protein accession | YP_001187099 |
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| Protein GI | 146306634 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.073582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0278892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCT ACAACTACGA TGTGGTGGTG CTGGGCTCCG GCCCGGCGGG CGAGGGCGCG
GCGATGAACG CGGCCAAGGC CGGGCGCAAG GTGGCGGTGG TGGACAACCG GCCGCTGGTC
GGCGGCAACT GCACCCACCT GGGCACCATT CCGTCCAAGG CGCTGCGCCA TTCGGTGCGG
CAGATCATGC AGTTCAACAC CAACCCGATG TTCCGCCAGA TCGGCGAGCC ACGCTGGTTT
TCCTTCCCCG ATGTGCTGAA AAGCGCGGAG AAGGTGATCG CCAAGCAGGT CACTTCGCGT
ACCGGCTACT ACGCTCGCAA CCGCATCGAC ACCTATTTCG GCACCGCCAG CTTCGCTGAC
GAGCAGACGG TCGAAGTCGT CTGCCTCAAT GGTGTGGTGG AAAAGCTGGT GGCCAAACAG
ATCGTCATCG CCACTGGTTC GCGTCCGTAC CGCCCGGCCG ATGTCGATTT CCGCCACCCG
CGTATCTACG ATAGCGACAC CATTCTCAGC CTGGGTCACA CACCGCGTCG TCTCATCATC
TACGGAGCGG GGGTGATCGG TTGCGAGTAC GCCTCGATCT TCAGTGGCCT GGGTGTGCTG
GTCGACCTGA TCGACAACCG CGATCAACTG CTCAGCTTCC TCGACTCGGA AATCTCCGAT
GCGCTTTCCT ACCACCTGCG CAACAACAAC GTGCTGATTC GTCACAACGA AGAGTACGAG
CGCATCGAGG GTGTGGAAAA CGGCGTGGTC CTGCACCTGA AGTCGGGCAA GAAGATCAAG
GCCGACGCCC TGCTGTGGTG TAACGGCCGC ACCGGCAATA CCGATCAGCT GGGCCTGGAA
AACATCGGTA TCGCGGTCAA CAGCCGTGGT CAGATCCAGG TCGACGAGCA TTACCGCACC
GAGGTCAGCA ACATCTACGC CGCCGGTGAC GTAATCGGCT GGCCGAGCCT GGCCAGTGCC
GCGGCTGACC AGGGCCGTTC CGCGGCCGGC AGCATCGTCG AAAACGGCAG CTGGCGTTTC
GTCGATGACG TGCCGACCGG CATCTACACC ATTCCGGAGA TCAGCTCGAT CGGCAAGACC
GAGCGTGAAC TGACCCAGGC CAAGGTGCCC TACGAAGTGG GCAAGGCCTT CTTCAAGGGC
ATGGCCCGTG CACAGATCTC GGTCGAGCCT GTGGGCATGC TGAAGATCCT CTTCCACCGT
GAAACCCTGG AAGTGCTGGG TGTGCACTGC TTCGGCTATC AGGCTTCGGA GATCGTCCAC
ATCGGTCAGG CGATCATGAA CCAGAAGGGC GAAGCCAACA GCATCAAATA CTTCATCAAC
ACCACCTTCA ACTACCCGAC CATGGCCGAG GCCTATCGGG TTGCCGCGTT CGACGGCCTC
AACCGGCTTT TTTGA
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| Protein sequence | MAVYNYDVVV LGSGPAGEGA AMNAAKAGRK VAVVDNRPLV GGNCTHLGTI PSKALRHSVR
QIMQFNTNPM FRQIGEPRWF SFPDVLKSAE KVIAKQVTSR TGYYARNRID TYFGTASFAD
EQTVEVVCLN GVVEKLVAKQ IVIATGSRPY RPADVDFRHP RIYDSDTILS LGHTPRRLII
YGAGVIGCEY ASIFSGLGVL VDLIDNRDQL LSFLDSEISD ALSYHLRNNN VLIRHNEEYE
RIEGVENGVV LHLKSGKKIK ADALLWCNGR TGNTDQLGLE NIGIAVNSRG QIQVDEHYRT
EVSNIYAAGD VIGWPSLASA AADQGRSAAG SIVENGSWRF VDDVPTGIYT IPEISSIGKT
ERELTQAKVP YEVGKAFFKG MARAQISVEP VGMLKILFHR ETLEVLGVHC FGYQASEIVH
IGQAIMNQKG EANSIKYFIN TTFNYPTMAE AYRVAAFDGL NRLF
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