Gene Pmen_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1582 
Symbol 
ID5109240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1745929 
End bp1746171 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content60% 
IMG OID640502810 
Producthypothetical protein 
Protein accessionYP_001187078 
Protein GI146306613 
COG category[S] Function unknown 
COG ID[COG4728] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.334945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTGC AGCCAGGACT CTATCGCCAC TACAAAGGCC CGCAGTACCG CGTATTCGGC 
GTGGCACGCC ATTCCGAGAC TGAGGAAGAA GTGGTGGTCT ATCAGGCCCT GTACGGCGAG
TTCGGCCTGT GGGTGCGGCC GCTGAGCATG TTCCGCGAAG AGATCGAAGT GGACGGCAAG
CGCGTTCCAC GCTTTGCTTT GATTCAGGCC GAAGTCAGCC CTATCGGCAG TTCGGAAGCC
TGA
 
Protein sequence
MQLQPGLYRH YKGPQYRVFG VARHSETEEE VVVYQALYGE FGLWVRPLSM FREEIEVDGK 
RVPRFALIQA EVSPIGSSEA