Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1544 |
Symbol | |
ID | 5108494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1703558 |
End bp | 1705168 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502772 |
Product | glutamate synthase (NADPH) |
Protein accession | YP_001187040 |
Protein GI | 146306575 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.443083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.726905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCT CGCTACTCAG CCGCTACGCG TTCTTCGTCT TCTGTGTGCT GTTCACGCTG GCCAGCCTGC CCTTTCTCCA TCATCAATGG CTGTGGCCGT TCGCCTTGCT CACGGGCGCG CTCAGCCTGA TCGGTATCGG CGACCTGCTG CAGAAGCGTC AGGCGGTCAG GCGCAACTAC CCGATCCTGG GCAATATCCG TTACCTGGTC GAAGGCATCC GCCCGGAGAT TCGCCAGTAT CTGCTCGAAG GTGACGCCGA GCAGCTGCCC TTCTCCCGCG CCCAGCGCTC GCTGGTCTAT GCCCGCGCCA AGAACGAGGG CGCCGACAAG CCCTTCGGCA CCCTGAGCGA CGTGTACCAG AACGGCTTCG AGTTCATCAG CCACTCCATG CGTCCGGCGC CGCTGAGCGA CCCGTGCAGC TTTCGCGTGG AGATTGGCGG GCCGCAGTGC AGCCAGCCGT ACTCGGCGTC GCTGTTCAAC ATTTCGGCGA TGAGCTTCGG CTCGCTCAGC GCCAACGCCA TCCGCGCCCT GAACCAGGGC GCCAAGCTCG GCGAGTTCTA TCACGACACC GGCGAGGGCA GCATCAGCCC CTACCACCGC GAGCACGGCG GCGATCTGGT GTGGGAACTG GGCAGCGGCT ATTTCGGCTG CCGCGCCTCG GACGGCCGCT TCGACCCCGA GCGCTTTGCC GTCCAGGCGG CCAGCCCGCA GGTGAAGATG ATCGAGATCA AGCTCAGCCA GGGCGCCAAG CCGGGCCATG GCGGCATCCT GCCCAAGCAC AAGGTCACCG AGGAAATCGC CAACACCCGC GGCGTACCCA TGGGTGAGGA CTGCATCTCG CCCTCGCGCC ACAGCGCCTT CTCCACGCCG ACCGAGCTGC TGCAGTTCAT CGCCCAGCTG CGCGAGCTGT CCGGCGGCAA GCCGGTGGGC TTCAAGTTCT GCCTGGGCCA CCCCTGGGAA TTCATGGGCA TCGTCAAGGC CATGCTGCAG ACCGGCATCC TGCCCGATTT CATCGTCGTC GACGGCAAGG AAGGCGGCAC CGGCGCGGCG CCGCTGGAGT TCACCGATCA CCTTGGCGTG CCGCTGCGCG AAGGTCTGCT GTTCGTGCAC AACACCCTGG TCGGCAGCAA CCTGCGCGAC AAGATCAAGC TCGGCGCCAG CGGCAAGATC GTCAGCGCCT TCGACATCGC CCGCGTGCTG GCCATCGGCG CCGACTGGGC CAACTCGGCA CGCGGCTTCA TGTTCGCCAT CGGCTGCATC CAGAGCCAAA GCTGCCATAC AAACAAGTGC CCCACCGGCG TGGCGACGCA GGACCCATTG CGCCAGCGCG CTCTGGTGGT CGAGGACAAG GCCCAGCGCG TCTACAACTT CCACCGCAAC ACACTCAAGG CGCTGGCCGA GATGCTCGCC GCTGCCGGCT TGGACCATCC CTCGCAGATC GATGCCAAGC ACCTGGTGCA GCGCCTGTCG GCCACCGAGA TCAAGCTGTT CGCCCAGCAG CATGTGTTCC TCGCGCCGGG CGAACTGCTC GGCGGCCAGA TCGAGGGCGA GTTCTACGAA CGCATGTGGC GCATGGCCCG CGCCGACAGT TTCGAGCCGG CGCCGGCCTG A
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Protein sequence | MNLSLLSRYA FFVFCVLFTL ASLPFLHHQW LWPFALLTGA LSLIGIGDLL QKRQAVRRNY PILGNIRYLV EGIRPEIRQY LLEGDAEQLP FSRAQRSLVY ARAKNEGADK PFGTLSDVYQ NGFEFISHSM RPAPLSDPCS FRVEIGGPQC SQPYSASLFN ISAMSFGSLS ANAIRALNQG AKLGEFYHDT GEGSISPYHR EHGGDLVWEL GSGYFGCRAS DGRFDPERFA VQAASPQVKM IEIKLSQGAK PGHGGILPKH KVTEEIANTR GVPMGEDCIS PSRHSAFSTP TELLQFIAQL RELSGGKPVG FKFCLGHPWE FMGIVKAMLQ TGILPDFIVV DGKEGGTGAA PLEFTDHLGV PLREGLLFVH NTLVGSNLRD KIKLGASGKI VSAFDIARVL AIGADWANSA RGFMFAIGCI QSQSCHTNKC PTGVATQDPL RQRALVVEDK AQRVYNFHRN TLKALAEMLA AAGLDHPSQI DAKHLVQRLS ATEIKLFAQQ HVFLAPGELL GGQIEGEFYE RMWRMARADS FEPAPA
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