Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1529 |
Symbol | |
ID | 5108479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1691143 |
End bp | 1692129 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502757 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001187025 |
Protein GI | 146306560 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.392114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGGCG GCAGTCTTGC CTTGCAGGGG GTGCTGGGCG GCATACCGAG GTTCGCCTGG GCCGACACCG CAACGGGCTG GCAGGCGACG GACATGCCGC CTTTGACCGG CAAGCGCATG CTGGTCACCG GCGGCAGCAG CGGCATGGGC TTCGAGGATG CTCTGGCGCT CAGTCGCGCT GGCGCGCAGG TGATCATCGC CGCGCGCAAC TCGCAGCGTG GCGCCGAGAG CATCGAACGC ATTCGTGCCC AGGTGCCGCA GGCCCAGCTG CGTTTCGAAC AGCTGGACCT GGCCGACCTG GCCTCGGTAC GCAGCCTGGC TCAGCGCCTG AATGCCGAGG GCGAGGTGCT GGACGTGCTG ATCAACAATG CCGCGATCAT GGCGCCGCCG CAGCGCGGCG TGTCTCGCGA CGGTTTCGAG ATGCAGCTGG CGACCAACTT CCTCGGCCAT TTCGCCCTGA CCGGTTTGCT CCTGTCGTCG CTGCGCAAGT CATCCGATCC GCGCGTGGTG ACACTGGCGA GCATCGCGGT CAATCGTGGT CGGATCGATT TCGACGACCT GCAGTCCGAG CGCAGCTACG ACCCCTATGC GGCTTACGCG CAGTCGAAGC TGGCCTGTCT GATGATGGCC TTCGAACTGC AGCGGCGCAG TCTGGCCAAC AACTGGGGCG TGCGCAGCAT CGCCGCGCAT CCTGGCGTGG CCGTCACCGA GCTGGTCGAG CGCGGGCCGG GACTGGACAG CGAGTTCGCG CGCCAGTGGG CGAAGGATCG CGAGGTCTAT CACTCGGCGG CGCAGGGCGC GCTGTCGTCA TTGTTCGCGG CGACGGCGGC CGAGGCCGAG GGTGGTCGTT ACTACGGACC GACCGGCGAA GAGGAAAAGC GCGGCCCCCT GGGGCTGGCC AAGGTACCGG CTGCCGCGGC GGATGCCGCT GATGCGGCGC GCCTGTGGTC GGTGGCCGAG CGCCTGACGG GCGTGAAGTA CGGCTAA
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Protein sequence | MVGGSLALQG VLGGIPRFAW ADTATGWQAT DMPPLTGKRM LVTGGSSGMG FEDALALSRA GAQVIIAARN SQRGAESIER IRAQVPQAQL RFEQLDLADL ASVRSLAQRL NAEGEVLDVL INNAAIMAPP QRGVSRDGFE MQLATNFLGH FALTGLLLSS LRKSSDPRVV TLASIAVNRG RIDFDDLQSE RSYDPYAAYA QSKLACLMMA FELQRRSLAN NWGVRSIAAH PGVAVTELVE RGPGLDSEFA RQWAKDREVY HSAAQGALSS LFAATAAEAE GGRYYGPTGE EEKRGPLGLA KVPAAAADAA DAARLWSVAE RLTGVKYG
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