Gene Pmen_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1499 
Symbol 
ID5108450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1660628 
End bp1661128 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content63% 
IMG OID640502728 
ProductMarR family transcriptional regulator 
Protein accessionYP_001186996 
Protein GI146306531 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.364247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.593095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACC GTGCACAACT GGCTGCCAAT CAGTGGCAGC AACAGCGTCC CGACCTGGAT 
GGCTTCTCCA TGGCCGTGAT CGGGCGCCTG GGCGAACTCA GCCAGGTGAT CAGTCGAGAC
CACCTGCTGC CGTTCTTCGC TGCACATGGC CTGCAGGCCG GCGAGTTCGA TCTGCTCGCC
ACCCTGCGCC GCTCGGGCGA ACCCTATGCG TTGATGCCCA CCACCCTTTA CGAGAGCGCG
ATGATTTCCT CGGGCGGCAT GACCAGCCGT ATAGACCGAC TGGAAAAGGC CGGGCTGATC
GAGCGGCGCA AACACCCCAG CGACCGTCGT GGCGTGCTGG TGGCACTGAC GCCTGCCGGT
TTCGATCTCA TCGATGGCAT GCTTGCCGCC CACGTCGCCA ACCTGCAGCG CGTGCTCTCA
GGATTGACCG TCGACGAGCA GCAGACGTTG CATGAATTGA CTGGCAAGCT GCTGGTGGGC
TTGGCTCAGC GAGATGAGTG A
 
Protein sequence
MQDRAQLAAN QWQQQRPDLD GFSMAVIGRL GELSQVISRD HLLPFFAAHG LQAGEFDLLA 
TLRRSGEPYA LMPTTLYESA MISSGGMTSR IDRLEKAGLI ERRKHPSDRR GVLVALTPAG
FDLIDGMLAA HVANLQRVLS GLTVDEQQTL HELTGKLLVG LAQRDE