Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1493 |
Symbol | |
ID | 5108444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1652379 |
End bp | 1652849 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502722 |
Product | dehydratase |
Protein accession | YP_001186990 |
Protein GI | 146306525 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0447243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGG TCACCAACAT CCCCTACGAC GCCCTCAGCA TCGGCCAGCA GGCCAGTTTC GAGAAGCATG TGCAGGAGCG CGACGTGCAA CTGTTCGCCG CCGTCTCGGG CGACAATAAC CCGGTGCACC TGGACGCCGA CTTCGCCGCC GAGACGATGT TCAAGGAGCG CATCGCCCAC GGCATGTTCA CCGGCGCGCT GATCAGCGCG GCCATCGCCT GCCGCCTGCC GGGCCCCGGC ACCATCTACC TCGGCCAGCA GCTCAAGTTC ACCCGCCCGG TGAAACTCGG CGATACCCTG ACCGTGCAGC TGGAAGTACT GGAAAAACTG CCGAAGAATC GCGTGCGCAT CGCCACCCGC GTGTTCAACC AGGACAACAA GCAGGTGGTC GACGGCGAAG CCGAAGTCCT CGCCCCGGCG AGCGAACAGA CAGTGACCAT GCCGGCCATG CCGCAGGTGA CTGTCGGCTG A
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Protein sequence | MTQVTNIPYD ALSIGQQASF EKHVQERDVQ LFAAVSGDNN PVHLDADFAA ETMFKERIAH GMFTGALISA AIACRLPGPG TIYLGQQLKF TRPVKLGDTL TVQLEVLEKL PKNRVRIATR VFNQDNKQVV DGEAEVLAPA SEQTVTMPAM PQVTVG
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