Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1482 |
Symbol | |
ID | 5108433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1641698 |
End bp | 1642441 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502711 |
Product | putative methyltransferase |
Protein accession | YP_001186979 |
Protein GI | 146306514 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.142219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCAAG AACCCGATCG CCTATTCGCC CAGCCGCTGG CCGAGGTGCC CGACTTCGTC TTCAACGAGG ACGTGGTGCG GGTGTTTCCC GACATGATCA AGCGCTCGGT GCCCGGCTAC CCGACCATCG TCGAGAACAT CGGCGTGCTC GCCGGCCAGT TCGCCCAGCC GCACACCACC CTGTATGACC TCGGCGCCTC GCTCGGTGCG GTGACCCAGG CGCTGCGCCG CCATGTGCGC ATCGATGGCT GCAAGGTCAT CGCCGTGGAC AACTCCCCGG CCATGGTCGC GCGCTGCAGC GAATACCTGC ACGCGCAGGA CGCCATGTTC CAGGAGCTGC TGCCGGTGGA GGTGATCGAG GCCGACATTC TTGCCCTCGA CCTGCAACCC ACCTCACTGG TCACGCTCAA CTTCACCCTG CAGTTCATCC CGCCAGAGCG GCGCCTGGAG CTGCTCACGC GCATTCGCCA GGCACTGTTG CCCGGTGGCG CGCTGATCCT CTCGGAGAAG CTGCGCTTCG AGGACGCTGC CGAGCATGAG CTGCTCACCG AGCTGCACGT CGCCTTCAAA CGCGCCAATG GCTACAGCGA ACTGGAAATC GCGCAGAAGC GCAGCGCCAT CGAGAAGGTG ATGCTGCCCG ACAGCCTCGA GCAGCACCGC GAACGCCTGC TGGCCGCTGG CTTCAGCAAG GTGGTGCCCT GGTTCCAGTG CCTGAACTTC GCCTCGCTGG TGGCCCTGCC ATGA
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Protein sequence | MSQEPDRLFA QPLAEVPDFV FNEDVVRVFP DMIKRSVPGY PTIVENIGVL AGQFAQPHTT LYDLGASLGA VTQALRRHVR IDGCKVIAVD NSPAMVARCS EYLHAQDAMF QELLPVEVIE ADILALDLQP TSLVTLNFTL QFIPPERRLE LLTRIRQALL PGGALILSEK LRFEDAAEHE LLTELHVAFK RANGYSELEI AQKRSAIEKV MLPDSLEQHR ERLLAAGFSK VVPWFQCLNF ASLVALP
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