Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1473 |
Symbol | |
ID | 5109762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1634952 |
End bp | 1635806 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640502702 |
Product | signal peptidase I |
Protein accession | YP_001186970 |
Protein GI | 146306505 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.199887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCA ATTTCCCGCT CCTGTTGATT ATCGCAGTCG CCGTTTGCGG CTTTCTGGCT CTGGTGGATC TGATTCTGCT GGCTCCGCGC CGTCGTGCGG CCATCGCGGC GTATCAGGGG CGGGTCGACG ATCCCGATGA CAGGGTGCTG GAGCGCCTGA GCAAGGAACC CTTGCTGGTC GAGTACGGCA AGTCGTTCTT CCCGGTGCTG GCCATCGTCC TGGTGCTGCG CTCGTTTCTG GTCGAGCCGT TCCAGATCCC GTCGGGCTCG ATGAAACCGA CCCTGGAAGT GGGCGATTTC ATTCTGGTCA ACAAGTTCGC CTATGGCATT CGCCTGCCGG TACTGGACAC CAAGGTGATC GAGGTGGACA ACCCGCAGCG CGGCGATGTG ATGGTGTTCC GCTACCCCAG CGATCCCACC ATCAACTACA TCAAGCGGGT GGTGGGCCTG CCGGGTGATC GCATCCAGTA CACCCAGGGC AAGCGCCTGC TGATCAATGG CGAGCCGGTA GCCGAAAAGC TGGTCGGCGA AGAAAGCGGC AGCCTGGGCA GTGCGATGCT CTATCAGGAG CGTCTAGGCC AGGTCGAGCA CACCATCCGC AAGGAAATGA CCCGTATGCG TCGTGAGCCC GGTGGTGAGT GGGTGGTCCC GCAAGGGCAC TACTTCATGA TGGGTGACAA CCGCGACAAC TCCAACGACA GCCGCTACTG GCGCGACCGT CATATCCCTC AGGAGCTGTG GGGCATGGTT CCGGACGACC ATATCGTCGG CAAGGCGTTC GCCATCTGGA TGAGCTGGCC GGAACCCAAG ACCAGCAATC TGCCCAACTT CTCGCGTGTC GGCCTGATTC ATTGA
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Protein sequence | MSINFPLLLI IAVAVCGFLA LVDLILLAPR RRAAIAAYQG RVDDPDDRVL ERLSKEPLLV EYGKSFFPVL AIVLVLRSFL VEPFQIPSGS MKPTLEVGDF ILVNKFAYGI RLPVLDTKVI EVDNPQRGDV MVFRYPSDPT INYIKRVVGL PGDRIQYTQG KRLLINGEPV AEKLVGEESG SLGSAMLYQE RLGQVEHTIR KEMTRMRREP GGEWVVPQGH YFMMGDNRDN SNDSRYWRDR HIPQELWGMV PDDHIVGKAF AIWMSWPEPK TSNLPNFSRV GLIH
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