| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1469 |
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| Symbol | |
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| ID | 5109758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1630135 |
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| End bp | 1631082 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502698 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_001186966 |
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| Protein GI | 146306501 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.162508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGA TACCCCTCTG TTTGCTCAGT GGTCTGCTCG CACTCCCGGT GCAGGCCACT
GAAGTGCAGG ATTGGCTGAG GCGCCTTGCC GAGGCCGAGC GCCAGCAAAG CTTTCAAGGC
ACCTTCATCT ACGAGCGTAA CGGCAGTTTT TCCACCCATG GCATCTGGCA TCGGGTGGAG
GAGGGGGGTG AGGTTCGCGA GCGCCTGTTG CAACTCGATG GGCCTGCCCA GGAAGTGCTC
AAGGTCGATG GCCAGGCCCA GTGCGTCAGC GGCGCCCTGG CTGACCAGGT CAGTGAGGAA
CAGGCCTGGC CTGCTCGGCA TCTCGATGCT GAGCAGCTGA GCAACTGGTA CGACATTCGC
GTGGCCGGCC AGTCGCGTGT CGCTGGCCGC AGCGCAGTAG TGCTGGTGCT GGCGCCGAAG
GATCAGCACC GCTATGGCTT CGAGCTGCAC CTGGACCGGG CAACCGGTCT GCCGCTGAAG
TCGCTGTTGC TCAACGAGCG CGGTCAGCTT CTTGAACGCT TTCAGTTCAC CCAATTCAAT
ACCGCCATCC CTGACGCGGC TGCGATGCAG CCCGGTTCGC GTTGCCGTCC GGTGCATTTT
CGCACCGTCG ATACGATGGC CGAAGGCAGT TGGCGCTCCG ACTGGCTGCC ACCCGGTTTC
ACCCTCAACA CCGCTCAGCT ACGACGCTTG CCGGCCTCGG ATGCGAAGGT TGCCTACCTG
ATGTACGGCG ATGGGCTGGC GCGTTTCTCG GTTTTCCTCG AGCCCTTGCA GGGCAACGTG
GTGGAAGATG CGCGCAGCCA GCTGGGGCCT ACCGTGGCGG TGTCGCGGCG CATGGCCACC
GAAGCCGGCG ACGTCATGGT CACCGTGGTC GGAGAGATTC CGCTGGGTAC CGCCGAGCGT
ATCGCCTTGT CCATGCGTGC CGGGGTGCCT GAACAGGCCA GCCAATGA
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| Protein sequence | MRAIPLCLLS GLLALPVQAT EVQDWLRRLA EAERQQSFQG TFIYERNGSF STHGIWHRVE
EGGEVRERLL QLDGPAQEVL KVDGQAQCVS GALADQVSEE QAWPARHLDA EQLSNWYDIR
VAGQSRVAGR SAVVLVLAPK DQHRYGFELH LDRATGLPLK SLLLNERGQL LERFQFTQFN
TAIPDAAAMQ PGSRCRPVHF RTVDTMAEGS WRSDWLPPGF TLNTAQLRRL PASDAKVAYL
MYGDGLARFS VFLEPLQGNV VEDARSQLGP TVAVSRRMAT EAGDVMVTVV GEIPLGTAER
IALSMRAGVP EQASQ
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