| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1431 |
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| Symbol | |
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| ID | 5109720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1591135 |
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| End bp | 1592631 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502660 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001186928 |
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| Protein GI | 146306463 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.352854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGG CTTTGCTCGT TGCACCGATT CTGATCCCGC TGTGCAGCCT GCTGCTAGCC
ACCGTGCTGC GGCGCCATCT GCTGGCGGTG CGCGCGCTCA GCCTGGGCGG CACCGGCCTG
CTGCTGGCGG CGGGCCTGGC GCTGGTCTGG CAGGCGGCTC ATGGCGTGGT GCTCAGCGGC
CAGGTCGGTG GCTGGCAGGC GCCGTTCGGC ATCAGCCTGG TGATTGATCG GCTGTCGGCG
GTGATGATCG CCATCAGCGC GCTGATCGCC CTGGTCACCC TGCTCTACGG CGTGGCGAAG
GACAACGACA CGCGCATCGG CCGCGATTTC CACCTGTTCG TCCAGGGCCT GCTGACCGGC
ATCTGCGGCG CCTTCATCAC CGCCGACATC TTCAACCTCT ACGTCTGGTT CGAGGTGCTG
CTGATCGCCT CCTTCGCCCT GATGGCCCTG GGCGGTGGCA GCCGCCGGCT GGCCGGCAGC
ATGACCTACG TGGCGCTGAA CCTGTTCGCC ACGCTGATCT TCCTGCTCGC CGCCGGCCTG
GTCTACGGTG CCAGCGGCAC GCTGAACATG GGTGAGCTGG CGATGATCAT GCGCAGCGGC
GAAGCGCCGC CCGGTGTCAC CCCGGCGCTG CTGCTGATGC TGCTGTCGTT CGCCATCAAG
GCCGCGCTGT TCCCGGTGTT CGGCTGGCTG CCGGCCACCT ACCACGTGGC GCTGACGGCG
GTCTCGGCGA TGTTCGCAGG GCTCTTGACC AAGGTCGGGG TGTACGCGCT GATTCGTCTG
GTGACCCTGC TCTGGCCGGA ATACGGCCTG CCGCACCAGC TGCTGCTGTG GGTCGCCTGC
GCCACCATGC TGGTGGGCGT GCTGGGCGCG GCGGCGCAGA CCGAGGTGCG CCGCATCCTG
TCGTTCCATA TCGTCAGCCA GGTCGGCTAC ATGATCCTCG GCCTCGCTCT GGCCACCCCG
CTGGCCCTGG CCGGCGCGGT GTTCTACCTG ATTCACCACA TCATCGTGAA GGCCAACCTG
TTCTTCATCG GCGGGCTGGC CGCGCGCATC TGCGGCTCCG AACGCCTGGT GGCCATGGGC
GGCCTGTACC GGCGCATGCC CTGGCTGGCG TTGCTGTTCG CCATCCCCGC CCTGTCGCTG
GCCGGCATAC CGCCGCTGTC CGGTTTCTGG GCCAAGTTCC TGCTGGTCAA GGCCAGCCTG
GATGCCGCCG CCTGGTGGGC TGCCGGCATC GCCCTGCTGA CCGGCGTGTT CACCCTGCTG
TCGATGAACA AGATCTGGAA CGAGGCCTTT CTCAAACCCC ATCCGCAGGG CGAGGAGGCG
CTGCAGCCGG TGCCTGGCAT GCGCGCGGCC TGGCTGGGCA TGGCCGGCCT GGCCCTGCTC
ACGGTGTTGA TCGGCCTGGG CGCCGGCCCC CTGATCGACT ACGCGGTGGC CGCCGCGGCG
CAACTGGCCG ATCCGCAGGC CTATCTGCAG CCCTTCGCAG CAGTGGGAGG TAACTGA
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| Protein sequence | MNQALLVAPI LIPLCSLLLA TVLRRHLLAV RALSLGGTGL LLAAGLALVW QAAHGVVLSG
QVGGWQAPFG ISLVIDRLSA VMIAISALIA LVTLLYGVAK DNDTRIGRDF HLFVQGLLTG
ICGAFITADI FNLYVWFEVL LIASFALMAL GGGSRRLAGS MTYVALNLFA TLIFLLAAGL
VYGASGTLNM GELAMIMRSG EAPPGVTPAL LLMLLSFAIK AALFPVFGWL PATYHVALTA
VSAMFAGLLT KVGVYALIRL VTLLWPEYGL PHQLLLWVAC ATMLVGVLGA AAQTEVRRIL
SFHIVSQVGY MILGLALATP LALAGAVFYL IHHIIVKANL FFIGGLAARI CGSERLVAMG
GLYRRMPWLA LLFAIPALSL AGIPPLSGFW AKFLLVKASL DAAAWWAAGI ALLTGVFTLL
SMNKIWNEAF LKPHPQGEEA LQPVPGMRAA WLGMAGLALL TVLIGLGAGP LIDYAVAAAA
QLADPQAYLQ PFAAVGGN
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