| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1408 |
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| Symbol | dcd |
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| ID | 5109697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1572690 |
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| End bp | 1573256 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502637 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_001186905 |
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| Protein GI | 146306440 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.390363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCA AATCGGACAA GTGGATTCGC CGCATGGCCC AGGAACACGG CATGATCGAG
CCGTTCGTAG AGCGCCAGGT ACGCGGTGCG GACTCCAGTC GAGTGATTTC CTACGGCGTG
TCCAGCTACG GCTACGACGT ACGCTGCGCC GACGAATTCA AGGTATTCAC CAATATCCAC
TCGGCCATCG TCGACCCGAA GAATTTCGAC GAGAAGAGCT TCGTCGACAT CAAGAGCGAC
GTCTGCATCA TCCCGCCGAA CTCCTTCGCC CTGGCCCGCA CGGTCGAGTA CTTCCGCATC
CCGCGCGACG TGCTGACCAT CTGCCTGGGC AAGAGCACCT ATGCGCGCTG CGGCATCATC
GTCAACGTCA CGCCGCTGGA GCCGGAGTGG GAAGGCCACG TGACCCTGGA GTTCTCCAAC
ACCACCAACC TGCCGGCGAA GATCTACGCC AACGAAGGCG TGGCGCAGAT GCTGTTCCTG
CAGTCCGACG AGGCCTGCGA AGTGTCCTAC AAGGACCGCG GCGGCAAGTA TCAGGGCCAG
ACTGGTGTGA CTCTGCCGCG AACCTGA
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| Protein sequence | MSIKSDKWIR RMAQEHGMIE PFVERQVRGA DSSRVISYGV SSYGYDVRCA DEFKVFTNIH
SAIVDPKNFD EKSFVDIKSD VCIIPPNSFA LARTVEYFRI PRDVLTICLG KSTYARCGII
VNVTPLEPEW EGHVTLEFSN TTNLPAKIYA NEGVAQMLFL QSDEACEVSY KDRGGKYQGQ
TGVTLPRT
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