Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1400 |
Symbol | |
ID | 5109689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1562431 |
End bp | 1563066 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502629 |
Product | electron transport complex, RnfABCDGE type, G subunit |
Protein accession | YP_001186897 |
Protein GI | 146306432 |
COG category | [C] Energy production and conversion |
COG ID | [COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG |
TIGRFAM ID | [TIGR01947] electron transport complex, RnfABCDGE type, G subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.50013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCCGG AAATCAGCCG CTCGATGCTG AAGAACGCCC TGGTGCTTGG CCTGTTCGCC ATCGGCACCG TCGGCAGCGT GGCCCTGCTG CAACAGGGCA CCGCCACGCG TATCGCCGCC GCCGAGCGCG AAGCGCAGGT GCGCGCGCTG GCCGAGATCC TGCCGGCAGG CAGCTACGAC AACCACCTGC TGGACAACCG CATCGAACTC AATGCCCCCG AGCTGGGCCA CCGCAGCCCG CAGTCGGCCT ACTTGGCATT GAAGGGCGAG CAGCCCAGCG CGCTGATCCT GCCGGTGACC GCACCGGACG GTTACAGCGG CGCCATCCAC CTGCTGGTGG GCATCTTCGC CGATGGCCGC CTGGCCGGCG TGCGCGTGCT TGGCCACCGA GAGACTCCGG GCCTGGGCGA CAAGATCGAA CTGGCCAAGA GCGACTGGAT ACGCAGCTTC GAGGGCAAGT CCCTGAGCGA TCCCAACGAA GACGGCTGGG CAGTGAAGAA GGATCGCGGC GAGTTCGACC AGTTCGCCGG CGCCACCATC ACCCCGCGCG CCGTGGTCAA GGCCGTGCAC GGCGCCCTGC GCTACTTCGA CAAGCACCGC GCCCAGTTGC TGGGTCTGGC GGAGGACGAG CAATGA
|
Protein sequence | MLPEISRSML KNALVLGLFA IGTVGSVALL QQGTATRIAA AEREAQVRAL AEILPAGSYD NHLLDNRIEL NAPELGHRSP QSAYLALKGE QPSALILPVT APDGYSGAIH LLVGIFADGR LAGVRVLGHR ETPGLGDKIE LAKSDWIRSF EGKSLSDPNE DGWAVKKDRG EFDQFAGATI TPRAVVKAVH GALRYFDKHR AQLLGLAEDE Q
|
| |