| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1371 |
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| Symbol | |
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| ID | 5109424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1536233 |
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| End bp | 1537117 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502600 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001186868 |
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| Protein GI | 146306403 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.853218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0694877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA TCGCCTTTAT CGGCCTCGGC CATATGGGCC TGCCCATGGC CCACAACCTG
CTCAAGGCGG GTTATCCGCT GAAAGTCTTC GACCTGGTGC GCAGCGCCGT CGACACCCTG
GCCGGCGAAG GCGCGGTGGC AGCCGAGAGC GCCGCCGATG CCAGCGATCA GGCACAGGTG
GTGATCAGCA TGCTGCCGGC CAGCCGCCAT GTGGAAGGCC TGTACCTGGG CGAAGACGGC
CTGCTCGCGC GGCTGCCCGC CGGCACGCTG GTGATCGAGT GCTCGACCAT CGCCCCGGAG
TCCGCGCGCA AGGTACACGC CGCTGCCCGT GAGCGCGGCG TCGCCCTGCT CGATGCGCCG
GTGTCCGGCG GCACGGCTGG CGCTGCCGCC GGTACCCTGA CCTTCATGGT CGGCGGCGAA
GCCCAGGCGC TGGAGAAGGC CCGGCCGATC CTCGCCGCCA TGGGCAGGAA TATCTTCCAT
GCCGGCCCGG ACGGCGCCGG CCAGGTGGCC AAGGTGTGCA ACAACCAGGT GCTCGCCGTG
CAGATGATCG CCACTGCCGA AGCCATGGCC ATGGGCGTGG CCAACGGCCT GGAGCCGGCG
GTGCTGGCCG AGATCATGCG GCAGAGTTCC GGTGGCAACT GGACGCTGGA GAAATACAAC
CCCTGGCCCG GGGTGATGGA GAACGCCCCG GCGTCCAAGG GCTACAGCGG TGGTTTCATG
GCCGAGCTGA TGGCCAAGGA CCTCGGCCTG GCCCAGGAAA CCGCCAGCCA CAGCGGCAAC
AGCACGCCCA TGGGCGCCCT GGCGCTGCAG CTGTATCGCC TGCTGCTCAA ACAGGGCAAG
GGCAAGCAGG ATTTCTCGGT GGTGCAGCAG CTGTTCGTGC AATAA
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| Protein sequence | MTQIAFIGLG HMGLPMAHNL LKAGYPLKVF DLVRSAVDTL AGEGAVAAES AADASDQAQV
VISMLPASRH VEGLYLGEDG LLARLPAGTL VIECSTIAPE SARKVHAAAR ERGVALLDAP
VSGGTAGAAA GTLTFMVGGE AQALEKARPI LAAMGRNIFH AGPDGAGQVA KVCNNQVLAV
QMIATAEAMA MGVANGLEPA VLAEIMRQSS GGNWTLEKYN PWPGVMENAP ASKGYSGGFM
AELMAKDLGL AQETASHSGN STPMGALALQ LYRLLLKQGK GKQDFSVVQQ LFVQ
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