| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1348 |
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| Symbol | |
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| ID | 5109401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1508296 |
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| End bp | 1509816 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502576 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001186845 |
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| Protein GI | 146306380 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC ACGTCAGCTT CATCGACCGC GTCGGCATCA CCCAGGAAGT CCTGGCGCTG
CTTGGCGGGC GCAATCTGAA CCTCGATGCG GTGGAGATGG TACCGCCAAA CGTCTACATC
GACGCACCGA CCCTGAGCGC CGCGGTGCTC GAGGAGCTGC GCGGCGCGCT GCTGCAGGTG
CATGGCGTGC AGAGCGTGGA GGTGGTGGAC ATTCTGCCCG GCCAGCGTCG CCGCCTGCAG
CTCGATGCCC TGCTCGCGGC CATGCCCGAC CCGGTGCTGG CGGTGGATGA CCGCGCCACC
GTGCTGCTGG CCAACCCGGC GCTGGTGGAG CTGTGCGGTC GCACGCCCGA AGGTCTGAGC
ATCGCCGCGC TGTTCGCCGA TGACGCACTG CAGCAATCGC TGCTCGCCGC CGGTTTCCAC
CAGCCGCTGC GCGAGGTGCA TTTCGCCGGC CAGCCGCTGC TGCTCGATGC CCAGCCGATC
ACCGAAGACG GTCGCCTGAC CGGTGGCCTG CTCACCCTTT ACGCCCCGAG CCGCATGGGC
CAGCGCCTGG CCGCGCTGCA TCATGATCAT GCCGAAGGCT TCGACTCGCT GCTCGGCGAA
TCGGCGCCGA TCCGCGCGCT CAAGGCTCGT GCCCTGCGCG TGGCGTCGCT CGACGCGCCG
CTGCTGATCC ACGGCGAAAC CGGTACCGGC AAGGAGCTGG TGGCACGCGC CTGTCATACC
GTCAGCGTGC GCCGCAATGC GCCCTTCCTC GCCCTGAACT GCGCCGCCCT GCCGGAGAAC
CTGGCCGAGA GCGAACTGTT CGGCTACGCC CCCGGCGCCT TTACCGGCGC CCAGCGCGGC
GGCAAGCCGG GGCTGTTGGA GCTGGCCAAC CAGGGCACGG TGTTTCTCGA CGAAATCGGC
GAAATGTCGC CCTATCTGCA GGCCAAGTTG CTGCGCTTTT TGAGCGACGG CAGCTTCCGC
CGCGTCGGTG GCGACCGCGA GGTGAAGGTG GACGTGCGTA TCCTCAGCGC CACCCACCGC
GACCTGGAAA AGATGGTGGC CGAAGGCAGC TTCCGCGAAG ACCTGTTCTA CCGCCTCAAC
GTGCTCAATC TGGAAGTGCC GCCGCTGCGC GAGCGCGGCC AGGACATCCT GCTGCTGGCC
CAGCACTTCA TGGCCCAGGC CTGCGCGCAG ATCCAGCGCC TACCCTGCCG CCTGGCGCCG
ACCACCTTCC CGGCGCTGCT GGCCGGGCGC TGGCCGGGCA ACGTGCGCCA GTTGCAGAAC
GTGATCTTCC GCGCCGCCGC GATCTGCGAC AGCAATTGGG TGGAGATGGA CGATCTGGAT
ATCGCCGGCA CCGAAGTGGC GCCGAAGGTG GAAGGGGAAG TCGCCAGCCT GGAACAGGCC
ATGGACGAGT ACGAGAAGGC GCTGCTGGAA AAGCTCTACG ACAGCCACCC CTCCAGCCGC
CAGTTGGCCG CACGCCTGGG TACCTCGCAC ACGGCCATCG CCAAGCGCCT GCGCAAGTAC
GGGATACCGG GCAAGCACTG A
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| Protein sequence | MRIHVSFIDR VGITQEVLAL LGGRNLNLDA VEMVPPNVYI DAPTLSAAVL EELRGALLQV
HGVQSVEVVD ILPGQRRRLQ LDALLAAMPD PVLAVDDRAT VLLANPALVE LCGRTPEGLS
IAALFADDAL QQSLLAAGFH QPLREVHFAG QPLLLDAQPI TEDGRLTGGL LTLYAPSRMG
QRLAALHHDH AEGFDSLLGE SAPIRALKAR ALRVASLDAP LLIHGETGTG KELVARACHT
VSVRRNAPFL ALNCAALPEN LAESELFGYA PGAFTGAQRG GKPGLLELAN QGTVFLDEIG
EMSPYLQAKL LRFLSDGSFR RVGGDREVKV DVRILSATHR DLEKMVAEGS FREDLFYRLN
VLNLEVPPLR ERGQDILLLA QHFMAQACAQ IQRLPCRLAP TTFPALLAGR WPGNVRQLQN
VIFRAAAICD SNWVEMDDLD IAGTEVAPKV EGEVASLEQA MDEYEKALLE KLYDSHPSSR
QLAARLGTSH TAIAKRLRKY GIPGKH
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