Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1323 |
Symbol | |
ID | 5109376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1483344 |
End bp | 1483907 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640502551 |
Product | peroxiredoxin |
Protein accession | YP_001186820 |
Protein GI | 146306355 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.337282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.829751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTCA TCAATACTCA GATCCAGCCG TTCAAGGTCA ACGCTTTCCA CGCTGGCGAG TTCATCGAAG TCACCGAGCA GTCCCTGAAG GGCAAATGGT CCGTGCTGAT CTTCATGCCG GCTGCCTTCA CCTTCAACTG CCCGACCGAA ATCGAAGACG CCGCCAACAA CTACGCCGAG TTCCAGAAGG CCGGTGCCGA GGTCTACATC GTGACCACCG ACACCCACTT CTCGCACAAG GTATGGCACG AAACTTCGCC GGCCGTTGGC AAGGCTCAGT TCCCGCTGAT CGGCGACCCC ACCCACCAGC TGACCAACGC TTTCGGCGTA CACATTCCGG AAGAAGGTCT GGCGCTGCGC GGCACCTTCA TCATCAACCC GGAAGGTCAG ATCAAGACTC TGGAGATCCA CTCCAACGAG ATCGCCCGTG ACGTGTCCGA GACCCTGCGC AAGCTGAAGG CCGCTCAGTA CACCGCCGCC AACCCGGGTC AGGTTTGCCC GGCCAAGTGG AAAGAAGGCG AAGCCACTCT GGCTCCGTCG CTGGACCTGG TTGGCAAGAT CTAA
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Protein sequence | MSLINTQIQP FKVNAFHAGE FIEVTEQSLK GKWSVLIFMP AAFTFNCPTE IEDAANNYAE FQKAGAEVYI VTTDTHFSHK VWHETSPAVG KAQFPLIGDP THQLTNAFGV HIPEEGLALR GTFIINPEGQ IKTLEIHSNE IARDVSETLR KLKAAQYTAA NPGQVCPAKW KEGEATLAPS LDLVGKI
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