Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1317 |
Symbol | |
ID | 5109133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1477009 |
End bp | 1477329 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502545 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001186814 |
Protein GI | 146306349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000865545 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTGC AAATCATTTC CCGCGATGGC GAACCGGAAT ATGCCGTGTT GCCCTGGGGC GAATATCAGG CATTGATGCA GGCGGCCGGG CGCCAGGAGC ATGCCGAGCC CGCTGCTGCG CAGCCGGTCG ATGCGCTGAA GCCTTCGCTC GAGCAACTGC AAGCGCTGCG TGAGGCCAAG GGCTTGAGCC CGGAGGCTCT GGCCCGCAGC GTGGGCATCA GTCCGCATTA CCTGGCCATG ATCGAGCGTG GCGAGCGCCG ACCCGACGCG GCCATCCTGC GTTCGCTGGC CTGGACCCTG GGGCTGGAGG GCTGGTCTTG A
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Protein sequence | MTVQIISRDG EPEYAVLPWG EYQALMQAAG RQEHAEPAAA QPVDALKPSL EQLQALREAK GLSPEALARS VGISPHYLAM IERGERRPDA AILRSLAWTL GLEGWS
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