| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1311 |
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| Symbol | |
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| ID | 5109127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1469988 |
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| End bp | 1470989 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502537 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001186808 |
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| Protein GI | 146306343 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0614753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.654838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGC GAATCGCCAT CAATGGTTTC GGCCGTATCG GCCGCAACGT GCTGCGTGCA
CTCTACACCC AGGATTATCG CCAGCATCTG CAGGTGGTGG CGATCAACGA CCTGGGCGAC
AGCGCCATGA ATGCCCACCT GCTGCGTCAT GACAGCGTAC ACGGCGCCTT TCCCGGCGAA
GTGGTGGCCG ATGGCGAGAG CCTGTGGGTC AACGGCGATC ACATCGCCGT CAGCGCCATT
CGCAACCCCG CCGAGCTGCC CTGGAGGGCG CATCAGGTCG ACGTGGTGTT CGAATGCACC
GGGCTGTTCA CCGATCGAGA CAAGGCCGCA GCCCACCTCG CTGCCGGTGC CCGTAAGGTG
TTGATCTCGG CGCCGGCCAA AGGTGCCGAC GCAACCGTGG TTTATGGGGT CAACGAGGCG
GTGCTGACGC CGGCCATGCA GATCGTCTCC AACGCCTCCT GCACCACAAA CTGCCTGGCC
CCGGTGGCCC AGGTGCTGCA CCGCGAGCTG GGCATCGAAC AGGGCCTGAT GACCACCATC
CACGCCTACA CCAACGACCA GAACCTCTCC GACGTCTACC ACAGCGACCC CTACCGCGCG
CGCTCGGCCA CCCAGTCGAT GATCCCGACC AAGACCGGCG CCGCCGAAGC GGTCGGCCTG
GTGCTGCCGG AGCTGGCCGG CAAGCTCACC GGCATGGCGG TGAGGGTGCC GGTGATCAAC
GTGTCGCTGG TCGACCTGAC CCTGCAGCTC AAGCGCGAGA CCAGCGCCGA AGAGGTCAAC
GCCCTGCTCA AGGCCGCCAG CGAGAAGTCG CCGGTGCTGG GCTACAATGC GCTGCCGCTG
GTGTCCTGCG ACTTCAACCA CAACCCGCTG TCGTCGATCT TCGACGCCAA CCACACCAAG
GTGAGCGGCA AGCTGCTCAA GGTGATGGCC TGGTACGACA ATGAATGGGG CTTCTCCAAC
CGCATGCTGG ACAACTGCCT GACCCTGGCC CGCCTGGGCT GA
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| Protein sequence | MTLRIAINGF GRIGRNVLRA LYTQDYRQHL QVVAINDLGD SAMNAHLLRH DSVHGAFPGE
VVADGESLWV NGDHIAVSAI RNPAELPWRA HQVDVVFECT GLFTDRDKAA AHLAAGARKV
LISAPAKGAD ATVVYGVNEA VLTPAMQIVS NASCTTNCLA PVAQVLHREL GIEQGLMTTI
HAYTNDQNLS DVYHSDPYRA RSATQSMIPT KTGAAEAVGL VLPELAGKLT GMAVRVPVIN
VSLVDLTLQL KRETSAEEVN ALLKAASEKS PVLGYNALPL VSCDFNHNPL SSIFDANHTK
VSGKLLKVMA WYDNEWGFSN RMLDNCLTLA RLG
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