Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1309 |
Symbol | |
ID | 5109125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1468992 |
End bp | 1469405 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502535 |
Product | peptidyl-tRNA hydrolase domain protein |
Protein accession | YP_001186806 |
Protein GI | 146306341 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.892435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.470671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCA TCTCCAATGC CGTGCATCTG CCGCTCGAGG AAATCGAGCT GAGCGCCATT CGCGCCCAGG GTGCCGGCGG GCAGAACGTC AACAAGGTGT CCAGCGCCGT GCACCTGCGC TTCGACAGCC AGGCCTCTTC GCTGCCGCCG TTCTACAAGG AGCGCCTGCT GGCGCTCGCC GACAGCCGCA TCACCGCCGG CGGCGTGGTG ATCATCAAGG CGCAGCAGTA TCGCACCCAG GAACAGAATC GCGCGGACGC CCTCGAGCGT TTGGCCGAGC TGATCCGCAG TGCCGGCAAG GTGGAAAAGA AGCGCCGCCC GACCAAGCCG ACCCTGGGCT CGAAGAAGCG CCGCCTGGAC GGCAAGAGCA AGCGCGGGGC GATCAAGGCG GGGCGGGGCA AGGTGGATTT CTAG
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Protein sequence | MLIISNAVHL PLEEIELSAI RAQGAGGQNV NKVSSAVHLR FDSQASSLPP FYKERLLALA DSRITAGGVV IIKAQQYRTQ EQNRADALER LAELIRSAGK VEKKRRPTKP TLGSKKRRLD GKSKRGAIKA GRGKVDF
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