| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1305 |
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| Symbol | |
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| ID | 5109121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1462977 |
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| End bp | 1464278 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502531 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001186802 |
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| Protein GI | 146306337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.409264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGG ACGAACTGCT CAGCCAACCA CAGGAACTGC TCAGCCGTTT CGAGCAATAT
CCCTGGCTCA GCGCAGCGGT AGGGCTCCTG GTGCTGCTGC TGATCGCGCT GGTGGCCGGA
CGCCTGGCGC GCTTTCTGAT CCTCCATTCG ACCCGCCTGC TGGCACGCCA GCCGGCCCTG
TTCTGGATCG AGCATCTGCG CCGCAACAAG GTGTTCAATC GCCTGGCACA GATGGTGCCG
TCGCTGGTGG TGCAGTTCGG CCTGGTGCTG GTACCCGATC TGAACGATCA GGCCGAGCAC
TTCCTGCGCA ACCTGGCGCT GGCCTTCACC CTGCTGTCGC TGACCCTGGC GCTCAATGCG
CTGCTCAACG CCCTGCTCGA TCTCTATGCA GGCACCCCGC ATGCGCGTAC CCGCTCGATC
AAGGGTTACG TGCAGCTGGC CAAGATGCTG CTGTACGTGT TCGCCGCCAT CGTCATCGTC
GCCACCCTGA TCGACCGCTC GCCCTTGCTC CTGCTGTCCG GCCTGGGTGC GATGTCGGCG
GTGATCCTGC TGGTGTACAA GGACACCCTG CTGTCGTTCG TCGCCGGTGT GCAGCTGACC
AGCAACGATT CCCTGCGCGT CGGCGACTGG ATCGAGATGC CCCAGGTCGG CGCCGACGGC
GATGTGGTGG ACATCACCCT GCACACGGTC AAGGTGCAGA ACTTCGACAA GACCATCGTC
TCCATTCCCA CCTGGCGCCT GATGGCCGAG TCGTTCAAGA ACTGGCGCGG CATGACCCAG
GCCGGCGGCC GACGGATCAA GCGCAGCCTG TATCTGGACG CAGGCCTGGT GCGCTTTCTC
GATGACGCCG AGGAGCAACG CCTGAGCGAC GTGCGCCTGC TCGCCGATTA CCTGGCGCGC
AAGCAGGCCG AACTGCGCCA GTGGAACGCC GAGCACAAGG CCGAGAACGG CCCCTCGGCC
AACCGCCGGC GCATGACCAA CATCGGCACC TTCCGCGCCT ATGCCGAGGC GTACCTCAAG
GACCATCCGC AGATCCGCCA GGACATGACC TGCATGGTGC GCCAGCTGCA GCCCGGAGCC
GAAGGTATCC CGCTGGAAAT CTACTGTTTC ACCGGCACCA CCAACTGGCT GGAGTACGAG
CGCATCCAGA GCGATATCTT CGATTACCTG CTGGCTCTGC TGCCGGAGTT CGACCTGGCG
CTGTATCAGC AGCCCGCCGG CAACGACCTG CGCCAGGGCC TGCAGGCTCT GGTTCAGCGA
CTTCCATCAC AAGCGCAACC GGCGCAGCAG GCCCGGGATT GA
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| Protein sequence | MDMDELLSQP QELLSRFEQY PWLSAAVGLL VLLLIALVAG RLARFLILHS TRLLARQPAL
FWIEHLRRNK VFNRLAQMVP SLVVQFGLVL VPDLNDQAEH FLRNLALAFT LLSLTLALNA
LLNALLDLYA GTPHARTRSI KGYVQLAKML LYVFAAIVIV ATLIDRSPLL LLSGLGAMSA
VILLVYKDTL LSFVAGVQLT SNDSLRVGDW IEMPQVGADG DVVDITLHTV KVQNFDKTIV
SIPTWRLMAE SFKNWRGMTQ AGGRRIKRSL YLDAGLVRFL DDAEEQRLSD VRLLADYLAR
KQAELRQWNA EHKAENGPSA NRRRMTNIGT FRAYAEAYLK DHPQIRQDMT CMVRQLQPGA
EGIPLEIYCF TGTTNWLEYE RIQSDIFDYL LALLPEFDLA LYQQPAGNDL RQGLQALVQR
LPSQAQPAQQ ARD
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