Gene Pmen_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1298 
Symbol 
ID5109114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1457527 
End bp1458126 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content64% 
IMG OID640502524 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_001186795 
Protein GI146306330 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.352068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.822829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTG TTCTGGTTAT CGAAAGCAGC GCCCGTCAGC AGGGCTCGGT TTCCCGCCAA 
CTGACCCAGC AATTCATCGC CAACTGGCAG GCCGCGCATC CGGCCGATCA GGTTCAGGTC
CGCGATGTGG CCAGCGACCC GCTGCCGCAT CTGGATGCGA CCCTGCTGGG TGGCTGGATG
ACCCCGAGCG AGCAGCAGAG CGACGCGGAA AAGGCGGCGC TGGCGCGTTC CAACGAGCTG
ACCGATGAGC TGCTGGCTGC CGATGTGCTG GTGCTGGCTG CGCCCATGTA CAACTTCGCC
ATTCCCAGCA CCCTGAAAGC CTGGCTCGAC CATGTGCTGC GTGCCGGCGT CACCTTCAAG
TACACCGAAA CCGGGCCGCA GGGGCTGCTG AGTGGCAAGC GTGCCTTCGT CCTCACCGCG
CGTGGTGGCA TCTACGCCGG TGGTGCGCTG GATCATCAGG AGCCCTATCT GCGTCAGGCA
CTGGCCTTCA TCGGCATCCA CGAGGTGCAG TTCATCCACG CCGAAGGTCT GAACATGGGC
GCCGAGTTCA GCGAGAAAGG CCTGGCCCAG GCCAAGGCCA AGCTGGCTGA AGTAGCCTGA
 
Protein sequence
MSRVLVIESS ARQQGSVSRQ LTQQFIANWQ AAHPADQVQV RDVASDPLPH LDATLLGGWM 
TPSEQQSDAE KAALARSNEL TDELLAADVL VLAAPMYNFA IPSTLKAWLD HVLRAGVTFK
YTETGPQGLL SGKRAFVLTA RGGIYAGGAL DHQEPYLRQA LAFIGIHEVQ FIHAEGLNMG
AEFSEKGLAQ AKAKLAEVA