Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1298 |
Symbol | |
ID | 5109114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1457527 |
End bp | 1458126 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502524 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_001186795 |
Protein GI | 146306330 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.352068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.822829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTG TTCTGGTTAT CGAAAGCAGC GCCCGTCAGC AGGGCTCGGT TTCCCGCCAA CTGACCCAGC AATTCATCGC CAACTGGCAG GCCGCGCATC CGGCCGATCA GGTTCAGGTC CGCGATGTGG CCAGCGACCC GCTGCCGCAT CTGGATGCGA CCCTGCTGGG TGGCTGGATG ACCCCGAGCG AGCAGCAGAG CGACGCGGAA AAGGCGGCGC TGGCGCGTTC CAACGAGCTG ACCGATGAGC TGCTGGCTGC CGATGTGCTG GTGCTGGCTG CGCCCATGTA CAACTTCGCC ATTCCCAGCA CCCTGAAAGC CTGGCTCGAC CATGTGCTGC GTGCCGGCGT CACCTTCAAG TACACCGAAA CCGGGCCGCA GGGGCTGCTG AGTGGCAAGC GTGCCTTCGT CCTCACCGCG CGTGGTGGCA TCTACGCCGG TGGTGCGCTG GATCATCAGG AGCCCTATCT GCGTCAGGCA CTGGCCTTCA TCGGCATCCA CGAGGTGCAG TTCATCCACG CCGAAGGTCT GAACATGGGC GCCGAGTTCA GCGAGAAAGG CCTGGCCCAG GCCAAGGCCA AGCTGGCTGA AGTAGCCTGA
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Protein sequence | MSRVLVIESS ARQQGSVSRQ LTQQFIANWQ AAHPADQVQV RDVASDPLPH LDATLLGGWM TPSEQQSDAE KAALARSNEL TDELLAADVL VLAAPMYNFA IPSTLKAWLD HVLRAGVTFK YTETGPQGLL SGKRAFVLTA RGGIYAGGAL DHQEPYLRQA LAFIGIHEVQ FIHAEGLNMG AEFSEKGLAQ AKAKLAEVA
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