| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1296 |
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| Symbol | |
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| ID | 5109112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1456076 |
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| End bp | 1457002 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502522 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186793 |
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| Protein GI | 146306328 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.46858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.712623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTC CCCGCGTAAC TCTGGATCAG TGGCGCACCT TGCAGGCAGT GGTGGATCAG
GGCGGTTTCG CCCAGGCCGC CGAGGTGCTG CACCGCTCGC AGTCCTCGGT CAGCTATACC
GTAGCGCGCA TGCAGGAGCA GCTCGGCGTG CCGCTGCTGC GCATCGATGG ACGCCGGGCG
GTTCTTACCG AAGCCGGCGA CGTGCTGCTG CGCCGCTCGC GGCAGCTGGT CAAGCAGGCC
AGCCAGCTGG AAGACCTGGC CCATCACATG GAGCAGGGCT GGGAAGCCGA GGTGCGCCTG
GTGGTCGATG CGGCCTATCC CACCGCCAAC CTGGTTCGTG CCCTGTCGGC CTTCATGCCG
CAGAGCCGCG GCTGCCGGGT GCGTCTGCGC GAGGAGGTGC TCTCGGGCGT CGAGGAAGTG
CTGCTCGAAG GTACCGCCGA CCTGGCCGTC AGCGCGCTGA ACATCACCGG CCACCTAGGT
ATCGAACTGG GCGAAGTGGA GTTCATCGCC GTCGCCCATC CGGAGCATCC GTTACATCGC
CTGCAACGCG AGCTGGGTTT TCAGGACCTG GAGGGCCAGA TGCAGGTGGT CACCCGCGAC
AGCGGCCGCC TGCAGCCGCG CGACGCCGGC TGGCTGGGCG CAGAGCAGCG CTGGACAGTG
GGCAGCCTGC CTACCGCGCG CACCTTCGTC AGCAGCGGCC TGGGCTTCGC CTGGCTGCCG
CGCCACCTGA TCAGCCGCGA GCTGCAGGAA GGCCTGCTCA AACCCCTGCC GCTGGCACAA
GGCGCCGTGC GCAAACCGCG CTTCTTCCTC TACAGCAACA AGGAGCGCGT ACTGGGCCCG
GCCACGCAGA TTCTCATCGA ACTGATCAAG AACTTCGACG CGGCCCCTCT GGACGCCGCC
TTCGCCGCCC CGCAGTCGCC CAACTGA
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| Protein sequence | MKAPRVTLDQ WRTLQAVVDQ GGFAQAAEVL HRSQSSVSYT VARMQEQLGV PLLRIDGRRA
VLTEAGDVLL RRSRQLVKQA SQLEDLAHHM EQGWEAEVRL VVDAAYPTAN LVRALSAFMP
QSRGCRVRLR EEVLSGVEEV LLEGTADLAV SALNITGHLG IELGEVEFIA VAHPEHPLHR
LQRELGFQDL EGQMQVVTRD SGRLQPRDAG WLGAEQRWTV GSLPTARTFV SSGLGFAWLP
RHLISRELQE GLLKPLPLAQ GAVRKPRFFL YSNKERVLGP ATQILIELIK NFDAAPLDAA
FAAPQSPN
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