Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1294 |
Symbol | |
ID | 5109110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1454708 |
End bp | 1455262 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502520 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_001186791 |
Protein GI | 146306326 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.81534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGC AACTCGTTCT CGCCACCGGC GCCCTGCTGC TGTCGTCCAG CCTGCTGGCC GCGGAAAATC CCAAGGTGCT GCTGACCACC AGCCTGGGTG AAGTGGAAGT GGAGCTGGCC GCCGACAAGG CACCGATCAG CACGCAGAAC TTTCTCAAGT ACGTCGACAG CGGCTTCTAC AACGGCACCC AGTTCCACCG GGTGATTCCC GGCTTCATGG TGCAGGGCGG CGGCTTCGAT GCCGACATGC GCCAGAAGGA CACCGATGCG CCGATCAAGA ACGAGGCCGA CAACGGCCTG CACAACGTGC GCGGCACCCT GGCCATGGCA CGTACCCAGG TACGCGACTC GGCCACCAGC CAGTTCTTCA TCAATCACAA GGACAACGCC TTCCTCGACC ACGGCTCGCG CGACTTCGGC TACGCCGTGT TCGGCAAGGT GACCCGCGGC ATGGACGTGG TGGACAAGAT CGCCCAGGTG CCCACCAGCA ACCGCGGCAT GCACCAGAAC GTGCCGCGCG AGCCGGTGCT GATCATCGAG GCCAAGCGTC TGTAA
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Protein sequence | MFKQLVLATG ALLLSSSLLA AENPKVLLTT SLGEVEVELA ADKAPISTQN FLKYVDSGFY NGTQFHRVIP GFMVQGGGFD ADMRQKDTDA PIKNEADNGL HNVRGTLAMA RTQVRDSATS QFFINHKDNA FLDHGSRDFG YAVFGKVTRG MDVVDKIAQV PTSNRGMHQN VPREPVLIIE AKRL
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