| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1282 |
|---|
| Symbol | |
|---|
| ID | 5106562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1441177 |
|---|
| End bp | 1442235 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640502508 |
|---|
| Product | quinolinate synthetase |
|---|
| Protein accession | YP_001186779 |
|---|
| Protein GI | 146306314 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0379] Quinolinate synthase |
|---|
| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA TTTCCGAACG CCTTCTGGTT CAAGCCCACC TCGATGCCAA GCAGCCCAAG
CCGCTGACCG CCGAGGAAGA GGCTTTCTAT CGCCGCGAAA TCGCCGCCGA GCTGAAGAAG
CAGAACGCGG TGCTGGTGGC GCACTATTAC TGCGATCCGG TCATCCAGGC CCTGGCCGAG
GAAACCGGTG GCTGCGTTTC CGACTCCCTG GAAATGGCCC GCTTCGGCAA CCAGCACCCG
GCGCAGACCG TGGTGGTGGC CGGGGTCAAG TTCATGGGCG AGACGGCGAA GATCCTCAAC
CCGGAAAAGC GCGTGCTGAT GCCGACGCTG GAGGCGACCT GTTCGCTGGA TCTGGGCTGC
CCGGTAGACG AATTTTCGGC CTTCTGCGAT CAGCATCCCG AGCGCACCGT GGTGGTGTAT
GCCAACACCT CGGCGGCGGT GAAGGCGCGT GCCGACTGGG TGGTGACCTC CAGCTGCGCG
CTGGAGATCG TCGAGAGCCT GATGGATAAC GGTGAGACCA TCATCTGGGC GCCGGACAAG
CATCTGGGCA ACTACATCCA GCGCGAGACC GGTGCCGACA TGCTGCTGTG GGACGGCGCC
TGCATCGTCC ACGAGGAGTT CAAGTCCAAG CAGCTGTTGG ACATGAAGGC GCTTTACCCC
GACGCCGCCA TCCTGGTGCA CCCGGAATCG CCGCAGAGCG TGGTGGAGCT GGCCGATGCC
GTGGGCTCCA CCAGCCAGCT GATCAAGGCG GCGCAGACCC TGCCGAATTC AACCTTCATC
GTCGCCACCG ACCGCGGCAT CTTCTACAAG ATGCAGCAGC TGTGCCCGGA CAAGACCTTC
ATCGAGGCGC CGACGGCCGG CAACGGCGCG GCCTGCCGCA GCTGTGCGCA CTGCCCGTGG
ATGGCGATGA ACACCCTGGA GCGCGTGCTG ACCGGCCTGC GTCAGGGCTC CGGTGAGATT
CATGTCGACC CGGCGCTGAT TCCCAAGGCG ATCAAGCCGC TCAAGCGCAT GCTCGATTTC
ACCCAGGCGG CGCGGATGAA GGTCGCCGGC AACGCCTGA
|
|---|
| Protein sequence | MTQISERLLV QAHLDAKQPK PLTAEEEAFY RREIAAELKK QNAVLVAHYY CDPVIQALAE
ETGGCVSDSL EMARFGNQHP AQTVVVAGVK FMGETAKILN PEKRVLMPTL EATCSLDLGC
PVDEFSAFCD QHPERTVVVY ANTSAAVKAR ADWVVTSSCA LEIVESLMDN GETIIWAPDK
HLGNYIQRET GADMLLWDGA CIVHEEFKSK QLLDMKALYP DAAILVHPES PQSVVELADA
VGSTSQLIKA AQTLPNSTFI VATDRGIFYK MQQLCPDKTF IEAPTAGNGA ACRSCAHCPW
MAMNTLERVL TGLRQGSGEI HVDPALIPKA IKPLKRMLDF TQAARMKVAG NA
|
|---|
| |