| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1280 |
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| Symbol | |
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| ID | 5109096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1439548 |
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| End bp | 1440228 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502505 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001186777 |
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| Protein GI | 146306312 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0602] Organic radical activating enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.281332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.805859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTGTT TCGTCATCAC GCCCGTGGCT ACCATGCAAG AAACCCTGCG CATCACCGAG
ATTTTCTACT CGTTGCAGGG GGAGACGCGT ACCGCCGGCT TGCCGACGGT GTTCGTGCGC
CTGACCGGCT GCCCCCTGCG CTGTCAGTAC TGTGACACCG CCTACGCCTT CAGCGGCGGC
GAGATCGTCA CGCTGGACAG CATCCTCGAT CAGGTGGCCG CCTATCGGCC GCGTTACGTC
TGCGTCACTG GCGGCGAGCC GCTGGCCCAG CCCAACTGCA TCCCCTTGCT CACGCGTCTG
TGCGACGCCG GTTACGAGGT GTCGCTGGAG ACCAGCGGCG CGCTCGACGT CTCGGCCGTC
GACCCGCGGG TCAGCAAGGT GCTGGATCTG AAGACGCCCG GTTCGGCTGA AGTGCAGCGC
AACCGTTACG AGAACATCGA GTGGCTGACC GCCAATGACC AGGTCAAGTT CGTCATCTGT
TCGCGCGAGG ACTACGATTG GGCAGTGTCC AAGCTGATCC AGTACGACCT GCCGGCCCGC
GCCGGCGAGG TGCTGTTCTC GCCCAGCCAC AAGCAGGTGG AAGCGCGGGC GCTGGCCGAC
TGGATAGTGG CGGACAACCT GCCGGTGCGC CTGCAACTGC AACTGCACAA GATTCTCTGG
AACGACGAGC CGGGACACTG A
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| Protein sequence | MTCFVITPVA TMQETLRITE IFYSLQGETR TAGLPTVFVR LTGCPLRCQY CDTAYAFSGG
EIVTLDSILD QVAAYRPRYV CVTGGEPLAQ PNCIPLLTRL CDAGYEVSLE TSGALDVSAV
DPRVSKVLDL KTPGSAEVQR NRYENIEWLT ANDQVKFVIC SREDYDWAVS KLIQYDLPAR
AGEVLFSPSH KQVEARALAD WIVADNLPVR LQLQLHKILW NDEPGH
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