| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1238 |
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| Symbol | |
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| ID | 5108739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1399429 |
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| End bp | 1400283 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502463 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001186735 |
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| Protein GI | 146306270 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.464073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.563177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC CACGTCGCAT TCTCAGCATT CAGCCAGGCC AGCCCGCGTC CGATGGCGCC
GGCGTGCGCC TCAACCGGGT GATCGGCGGG CCAGGCCTGG AACGCTTCGA TCCGTTTCTG
ATGCTCGACG AGTTCTCCAG CAACGACCCC GATGACTACA TCGCCGGCTT CCCGCCTCAC
CCGCACCGCG GCTTCGAGAC CATCACCTAC ATGCTCGAAG GACGCATGCG GCACGAGGAC
CACCTGGGCA ACGTCGGCTT GCTCGGCAGC GGCGGCGTGC AGTGGATGAC CGCAGCACGC
GGCATCATCC ACAGCGAGAT GCCCGAGCAG GAGTCCGGCG CCATGCGCGG CTTCCAGCTG
TGGCTCAACC TGCCGGCCAA GGACAAGCTG GGCGAAGCGG GCTATCGCGA CATACCGGCG
CAGCAGATCC CGCGTCTGAC CACCTCGGCC GGTGTGGAGG TGGTGGTGAT CGCCGGGCAG
TTCGATGACG GTGAAATCAG CCAGGCCGGC GCGGTGCAGC GTCCGCACAC CGAGCCGCAG
CTGTTCGATC TGCACCTGCC GCCCGGCAGC CGGATCGCGC CGCGCCTGGC CGACGGTCAG
CGGGTCATGC TCTACGTCTA CGAAGGCCTG CTCGAACTGC CCGAGGCCAG CAAGCAGGCG
GTCAGCGCCG GGCACCTGGT GCGCCTGACG GATGAGGGGC AACTGCAACT GGCCAGCGCC
CAGGGCGCAC GCGTGCTGCT GATCGCCGGC ACGCCGCTGC GCGAACCCAT CGTGCAATAC
GGGCCGTTCG TGATGAACAG CCGCGAGGAA ATCGAGCAGG CCCTGCGTGA CTTCCGTGAC
GGCGTGCTGG CCTGA
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| Protein sequence | MTDPRRILSI QPGQPASDGA GVRLNRVIGG PGLERFDPFL MLDEFSSNDP DDYIAGFPPH
PHRGFETITY MLEGRMRHED HLGNVGLLGS GGVQWMTAAR GIIHSEMPEQ ESGAMRGFQL
WLNLPAKDKL GEAGYRDIPA QQIPRLTTSA GVEVVVIAGQ FDDGEISQAG AVQRPHTEPQ
LFDLHLPPGS RIAPRLADGQ RVMLYVYEGL LELPEASKQA VSAGHLVRLT DEGQLQLASA
QGARVLLIAG TPLREPIVQY GPFVMNSREE IEQALRDFRD GVLA
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